Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 U6.101-201ENST00000637707 76 ntBASIC5.5□□□□□ -1.53
CHRNA4P43681 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHRNA4P43681 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA4P43681 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA4P43681 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA4P43681 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA4P43681 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA4P43681 AC109446.4-201ENST00000623235 2755 ntBASIC5.5□□□□□ -1.53
CHRNA4P43681 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA4P43681 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA4P43681 AC008669.1-201ENST00000565823 2178 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA4P43681 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 LINC01963-201ENST00000562038 3148 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHRNA4P43681 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA4P43681 IGKV7-3-201ENST00000357453 298 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 MIR335-201ENST00000362173 94 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 Y_RNA.65-201ENST00000362846 100 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 SNORA51.1-201ENST00000363243 140 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 Y_RNA.314-201ENST00000365114 102 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA4P43681 AL359265.2-201ENST00000434367 631 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 TIMM9P1-201ENST00000436122 256 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 RPS3AP12-201ENST00000443616 753 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHRNA4P43681 RPL9P32-201ENST00000464118 620 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.49□□□□□ -1.53
CHRNA4P43681 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.49□□□□□ -1.53
CHRNA4P43681 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.49□□□□□ -1.53
CHRNA4P43681 RNU6-1278P-201ENST00000516130 107 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 RNU6-479P-201ENST00000516348 105 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 SCARNA20.4-201ENST00000516969 131 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 AF279873.1-201ENST00000523393 313 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 AP006587.4-201ENST00000526053 529 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 AC011979.2-201ENST00000527568 352 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.49□□□□□ -1.53
CHRNA4P43681 AC127381.1-201ENST00000555979 939 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 SNORD95-201ENST00000579879 68 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CHRNA4P43681 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA4P43681 AL031320.1-201ENST00000604177 357 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA4P43681 DUSP12P1-201ENST00000612874 516 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 AL357559.1-201ENST00000622228 274 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 AL445363.3-201ENST00000623080 671 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 AC021753.1-201ENST00000635724 168 ntBASIC5.49□□□□□ -1.53
CHRNA4P43681 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA4P43681 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CHRNA4P43681 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.48□□□□□ -1.53
CHRNA4P43681 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CHRNA4P43681 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.48□□□□□ -1.53
CHRNA4P43681 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA4P43681 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 AC027287.1-201ENST00000553115 1453 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 RNA5SP242-201ENST00000364171 118 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
CHRNA4P43681 RNU6-128P-201ENST00000383976 107 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 RNU6-641P-201ENST00000384006 107 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 SNORA17A-201ENST00000391185 133 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AL359643.1-201ENST00000404109 423 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AL583834.1-201ENST00000406943 343 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 MIR1298-201ENST00000408783 112 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CHRNA4P43681 AL590632.1-201ENST00000424289 371 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 USP9YP30-201ENST00000430729 455 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.48□□□□□ -1.53
CHRNA4P43681 RPL23AP43-201ENST00000446445 471 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AL031584.1-201ENST00000447169 754 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA4P43681 LINC01399-202ENST00000458450 244 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.48□□□□□ -1.53
CHRNA4P43681 PGAM1P13-201ENST00000507497 754 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 EIF3KP3-201ENST00000514461 639 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.48□□□□□ -1.53
CHRNA4P43681 AP004607.2-201ENST00000533949 322 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.48□□□□□ -1.53
CHRNA4P43681 AC090751.1-201ENST00000566966 267 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA4P43681 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA4P43681 AC068790.3-201ENST00000602988 553 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AC020910.3-201ENST00000603701 874 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AC000068.2-201ENST00000608816 460 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AC103710.2-201ENST00000609912 942 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.48□□□□□ -1.53
CHRNA4P43681 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA4P43681 SNORA17.5-201ENST00000630429 132 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CHRNA4P43681 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CHRNA4P43681 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms