Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GDNFP39905 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GDNFP39905 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GDNFP39905 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GDNFP39905 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GDNFP39905 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
GDNFP39905 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.79□□□□□ -1.64
GDNFP39905 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GDNFP39905 AC100757.1-201ENST00000616872 1835 ntBASIC4.79□□□□□ -1.64
GDNFP39905 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GDNFP39905 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
GDNFP39905 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.78□□□□□ -1.64
GDNFP39905 RNU1-150P-201ENST00000362491 162 ntBASIC4.78□□□□□ -1.64
GDNFP39905 Y_RNA.288-201ENST00000364854 92 ntBASIC4.78□□□□□ -1.64
GDNFP39905 RNU6-1293P-201ENST00000384077 107 ntBASIC4.78□□□□□ -1.64
GDNFP39905 RNU6-1127P-201ENST00000384580 107 ntBASIC4.78□□□□□ -1.64
GDNFP39905 SNORA48.4-201ENST00000391089 134 ntBASIC4.78□□□□□ -1.64
GDNFP39905 DBIP1-201ENST00000401435 260 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AC069218.2-201ENST00000411665 344 ntBASIC4.78□□□□□ -1.64
GDNFP39905 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.78□□□□□ -1.64
GDNFP39905 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AC234779.1-201ENST00000425910 285 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.78□□□□□ -1.64
GDNFP39905 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 RPL19P16-201ENST00000433839 588 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 AC016696.1-201ENST00000446949 318 ntBASIC4.78□□□□□ -1.64
GDNFP39905 RPL21P8-201ENST00000465083 535 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.78□□□□□ -1.64
GDNFP39905 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.78□□□□□ -1.64
GDNFP39905 HMGB3P17-201ENST00000504195 649 ntBASIC4.78□□□□□ -1.64
GDNFP39905 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.78□□□□□ -1.64
GDNFP39905 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.78□□□□□ -1.64
GDNFP39905 VN1R104P-201ENST00000505115 1009 ntBASIC4.78□□□□□ -1.64
GDNFP39905 RNU2-53P-201ENST00000516257 147 ntBASIC4.78□□□□□ -1.64
GDNFP39905 SCARNA16.2-201ENST00000516520 172 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AL133271.1-201ENST00000538229 291 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AL133153.1-201ENST00000557756 303 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.78□□□□□ -1.64
GDNFP39905 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.78□□□□□ -1.64
GDNFP39905 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.78□□□□□ -1.64
GDNFP39905 AL590099.1-201ENST00000615276 138 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AC137590.2-201ENST00000619709 240 ntBASIC4.78□□□□□ -1.64
GDNFP39905 uc_338.7-201ENST00000621834 124 ntBASIC4.78□□□□□ -1.64
GDNFP39905 RNU6-156P-201ENST00000621869 107 ntBASIC4.78□□□□□ -1.64
GDNFP39905 AL445363.3-201ENST00000623080 671 ntBASIC4.78□□□□□ -1.64
GDNFP39905 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 AL592148.3-201ENST00000608771 2646 ntBASIC4.78□□□□□ -1.64
GDNFP39905 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
GDNFP39905 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
GDNFP39905 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GDNFP39905 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
GDNFP39905 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.77□□□□□ -1.65
GDNFP39905 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GDNFP39905 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
GDNFP39905 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
GDNFP39905 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GDNFP39905 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GDNFP39905 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GDNFP39905 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GDNFP39905 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.77□□□□□ -1.65
GDNFP39905 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GDNFP39905 Y_RNA.210-201ENST00000364161 110 ntBASIC4.77□□□□□ -1.65
GDNFP39905 SNORD82-201ENST00000365530 70 ntBASIC4.77□□□□□ -1.65
GDNFP39905 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GDNFP39905 RNA5SP296-201ENST00000410523 111 ntBASIC4.77□□□□□ -1.65
GDNFP39905 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.77□□□□□ -1.65
GDNFP39905 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.77□□□□□ -1.65
GDNFP39905 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AC126120.1-201ENST00000431082 470 ntBASIC4.77□□□□□ -1.65
GDNFP39905 HIGD1AP11-201ENST00000438361 280 ntBASIC4.77□□□□□ -1.65
GDNFP39905 RPL21P2-201ENST00000440049 481 ntBASIC4.77□□□□□ -1.65
GDNFP39905 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.77□□□□□ -1.65
GDNFP39905 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.77□□□□□ -1.65
GDNFP39905 OR1H1P-201ENST00000448731 937 ntBASIC4.77□□□□□ -1.65
GDNFP39905 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.77□□□□□ -1.65
GDNFP39905 SNORD121B-201ENST00000458838 81 ntBASIC4.77□□□□□ -1.65
GDNFP39905 DYNLL1P5-201ENST00000467158 270 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AL122020.1-201ENST00000472287 459 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AP000797.2-201ENST00000475768 606 ntBASIC4.77□□□□□ -1.65
GDNFP39905 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.77□□□□□ -1.65
GDNFP39905 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.77□□□□□ -1.65
GDNFP39905 HMGB1P21-201ENST00000502313 581 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AC074255.1-201ENST00000511259 501 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AC021146.3-201ENST00000511911 260 ntBASIC4.77□□□□□ -1.65
GDNFP39905 RNU6-406P-201ENST00000516470 107 ntBASIC4.77□□□□□ -1.65
GDNFP39905 RNA5SP384-201ENST00000516615 116 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AC139365.2-201ENST00000517972 253 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AC131281.1-201ENST00000522984 164 ntBASIC4.77□□□□□ -1.65
GDNFP39905 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.77□□□□□ -1.65
GDNFP39905 TRIM77BP-201ENST00000524985 1119 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms