Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXD13P35453 MTND4LP31-201ENST00000514859 294 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 SNORA3.4-201ENST00000515969 96 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 RNU1-95P-201ENST00000516357 160 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 RNU1-128P-201ENST00000516704 160 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 RNU6-579P-201ENST00000516879 102 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 COX6CP8-201ENST00000522620 226 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 EEF1A1P37-201ENST00000522748 715 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXD13P35453 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 FAM60BP-201ENST00000578364 658 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 AC006254.3-201ENST00000603353 884 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 AL034351.1-201ENST00000605288 668 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 AL355810.1-201ENST00000614629 552 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 AL391261.4-201ENST00000616012 481 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 RPS4XP5-202ENST00000449995 1334 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD13P35453 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HOXD13P35453 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD13P35453 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD13P35453 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
HOXD13P35453 RNU6-462P-201ENST00000362659 105 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 RNU6-931P-201ENST00000363850 107 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 RNU1-64P-201ENST00000365443 163 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD13P35453 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD13P35453 AL445189.1-201ENST00000405722 338 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 U3.39-201ENST00000408569 239 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD13P35453 AL365396.1-201ENST00000430854 671 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXD13P35453 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXD13P35453 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD13P35453 AC122718.1-201ENST00000439448 744 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 MTND5P14-201ENST00000441481 1267 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 RPS29P31-201ENST00000446147 164 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 AC010655.1-201ENST00000449336 292 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 MTCO3P16-201ENST00000454456 754 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXD13P35453 RPL23AP31-201ENST00000456160 467 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 FAM133DP-201ENST00000464802 691 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 SNRPGP3-201ENST00000469405 227 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXD13P35453 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXD13P35453 RN7SKP287-201ENST00000516546 266 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXD13P35453 SNRPGP16-201ENST00000533275 226 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXD13P35453 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXD13P35453 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXD13P35453 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD13P35453 AC011451.2-201ENST00000604303 598 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 AL391497.1-201ENST00000608671 547 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 U7.8-201ENST00000619968 63 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD13P35453 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD13P35453 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
HOXD13P35453 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HOXD13P35453 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.93□□□□□ -1.78
HOXD13P35453 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD13P35453 AL645937.1-201ENST00000641739 1652 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 OR5H2-201ENST00000355273 945 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HOXD13P35453 DEFB109C-201ENST00000382575 264 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 DEFB109B-201ENST00000382656 264 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 SNORA5A-201ENST00000384111 134 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 RN7SKP202-201ENST00000410439 330 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 RNU4-65P-201ENST00000410473 140 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 RN7SKP53-201ENST00000411337 315 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD13P35453 CCDC58P2-201ENST00000417131 366 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD13P35453 AL035407.1-201ENST00000429211 571 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC004866.2-201ENST00000438285 481 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC002381.1-201ENST00000447049 280 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 RPS3AP46-201ENST00000448352 682 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD13P35453 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXD13P35453 HMGN2P16-201ENST00000456802 261 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD13P35453 FCF1P3-201ENST00000496394 590 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC108043.1-201ENST00000512696 574 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms