Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
GPC1P35052 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.65□□□□□ -1.5
GPC1P35052 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
GPC1P35052 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
GPC1P35052 SAMMSON-213ENST00000641336 1521 ntBASIC5.65□□□□□ -1.5
GPC1P35052 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GPC1P35052 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GPC1P35052 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GPC1P35052 RN7SKP250-201ENST00000363924 321 ntBASIC5.65□□□□□ -1.5
GPC1P35052 SNORD73A-201ENST00000386062 65 ntBASIC5.65□□□□□ -1.5
GPC1P35052 SAR1AP2-201ENST00000392696 594 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AL603910.2-201ENST00000407268 136 ntBASIC5.65□□□□□ -1.5
GPC1P35052 RNU4-65P-201ENST00000410473 140 ntBASIC5.65□□□□□ -1.5
GPC1P35052 Y_RNA.793-201ENST00000411222 111 ntBASIC5.65□□□□□ -1.5
GPC1P35052 RPS23P10-201ENST00000416185 486 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC1P35052 RPS12P5-201ENST00000423449 371 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AC096920.1-201ENST00000423991 241 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AL590399.2-201ENST00000427536 309 ntBASIC5.65□□□□□ -1.5
GPC1P35052 RPL23AP25-201ENST00000430973 463 ntBASIC5.65□□□□□ -1.5
GPC1P35052 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.65□□□□□ -1.5
GPC1P35052 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC1P35052 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC1P35052 FTLP8-201ENST00000446770 267 ntBASIC5.65□□□□□ -1.5
GPC1P35052 GAPDHP27-201ENST00000447427 1020 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 AC007967.1-201ENST00000455422 1159 ntBASIC5.65□□□□□ -1.5
GPC1P35052 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 RNU4-71P-201ENST00000516258 113 ntBASIC5.65□□□□□ -1.5
GPC1P35052 RNU6-390P-201ENST00000516259 103 ntBASIC5.65□□□□□ -1.5
GPC1P35052 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.65□□□□□ -1.5
GPC1P35052 OR10G5P-201ENST00000532733 358 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.65□□□□□ -1.5
GPC1P35052 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 AMZ2P1-203ENST00000565833 850 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 NF1P5-201ENST00000588287 448 ntBASIC5.65□□□□□ -1.5
GPC1P35052 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC1P35052 AC012669.1-201ENST00000603209 283 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AC006363.1-201ENST00000603806 463 ntBASIC5.65□□□□□ -1.5
GPC1P35052 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.65□□□□□ -1.5
GPC1P35052 AC000095.2-202ENST00000637415 154 ntBASIC5.65□□□□□ -1.5
GPC1P35052 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.65□□□□□ -1.51
GPC1P35052 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GPC1P35052 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GPC1P35052 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
GPC1P35052 DDX18P3-201ENST00000404856 2007 ntBASIC5.65□□□□□ -1.51
GPC1P35052 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GPC1P35052 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GPC1P35052 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.65□□□□□ -1.51
GPC1P35052 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.65□□□□□ -1.51
GPC1P35052 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
GPC1P35052 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC1P35052 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GPC1P35052 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
GPC1P35052 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 AL137003.2-201ENST00000606924 2538 ntBASIC5.64□□□□□ -1.51
GPC1P35052 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 Y_RNA.183-201ENST00000363882 113 ntBASIC5.64□□□□□ -1.51
GPC1P35052 Y_RNA.200-201ENST00000364018 102 ntBASIC5.64□□□□□ -1.51
GPC1P35052 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
GPC1P35052 Y_RNA.506-201ENST00000384494 102 ntBASIC5.64□□□□□ -1.51
GPC1P35052 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
GPC1P35052 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC1P35052 THEM7P-201ENST00000419556 672 ntBASIC5.64□□□□□ -1.51
GPC1P35052 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC1P35052 AC092423.1-201ENST00000430165 186 ntBASIC5.64□□□□□ -1.51
GPC1P35052 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC1P35052 FHP1-201ENST00000442741 703 ntBASIC5.64□□□□□ -1.51
GPC1P35052 TMSB4XP3-201ENST00000445144 114 ntBASIC5.64□□□□□ -1.51
GPC1P35052 PPIAP7-201ENST00000454070 489 ntBASIC5.64□□□□□ -1.51
GPC1P35052 AC234775.1-201ENST00000454247 670 ntBASIC5.64□□□□□ -1.51
GPC1P35052 TRBV5-2-201ENST00000489095 273 ntBASIC5.64□□□□□ -1.51
GPC1P35052 AL117692.1-201ENST00000494283 713 ntBASIC5.64□□□□□ -1.51
GPC1P35052 ACA59.1-201ENST00000515966 143 ntBASIC5.64□□□□□ -1.51
GPC1P35052 AP000620.1-201ENST00000527147 504 ntBASIC5.64□□□□□ -1.51
GPC1P35052 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC1P35052 AC004584.2-201ENST00000570407 410 ntBASIC5.64□□□□□ -1.51
GPC1P35052 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC1P35052 SMIM12P1-201ENST00000603004 274 ntBASIC5.64□□□□□ -1.51
GPC1P35052 AL160281.1-201ENST00000605307 311 ntBASIC5.64□□□□□ -1.51
GPC1P35052 AC006023.2-201ENST00000609916 167 ntBASIC5.64□□□□□ -1.51
GPC1P35052 TUG1_2.1-201ENST00000614234 87 ntBASIC5.64□□□□□ -1.51
GPC1P35052 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC1P35052 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC1P35052 AC073488.6-201ENST00000632293 754 ntBASIC5.64□□□□□ -1.51
GPC1P35052 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC1P35052 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC1P35052 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms