Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL450489.1-201ENST00000612071 468 ntBASIC3.52□□□□□ -1.85
CHRNA3P32297 AL592148.2-201ENST00000612210 372 ntBASIC3.52□□□□□ -1.85
CHRNA3P32297 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.52□□□□□ -1.85
CHRNA3P32297 AL360181.4-201ENST00000621752 134 ntBASIC3.52□□□□□ -1.85
CHRNA3P32297 PLCE1P1-201ENST00000622094 305 ntBASIC3.52□□□□□ -1.85
CHRNA3P32297 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHRNA3P32297 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHRNA3P32297 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.52□□□□□ -1.85
CHRNA3P32297 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA3P32297 RPL7P26-201ENST00000333817 754 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 RNU1-33P-201ENST00000364249 162 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA3P32297 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA3P32297 RN7SKP111-201ENST00000410349 271 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 HMGB3P23-201ENST00000414981 585 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 USP9YP21-201ENST00000420603 432 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 MTCO2P23-201ENST00000425216 680 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA3P32297 OFD1P3Y-201ENST00000453312 783 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 AC008155.2-201ENST00000464337 397 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 HMGB1P25-201ENST00000468402 607 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 KCTD9P5-201ENST00000504141 1170 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 AC112198.1-201ENST00000505369 1220 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA3P32297 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA3P32297 AC068657.1-201ENST00000520807 306 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.51□□□□□ -1.85
CHRNA3P32297 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA3P32297 AC021451.1-201ENST00000523498 1129 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 AC018630.1-201ENST00000541376 925 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 AC011611.1-201ENST00000552179 197 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA3P32297 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA3P32297 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.51□□□□□ -1.85
CHRNA3P32297 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA3P32297 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA3P32297 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA3P32297 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 AL157770.1-201ENST00000623049 439 ntBASIC3.51□□□□□ -1.85
CHRNA3P32297 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA3P32297 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA3P32297 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CHRNA3P32297 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AL645937.1-201ENST00000641739 1652 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA3P32297 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA3P32297 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA3P32297 RNA5SP267-201ENST00000364893 126 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 Y_RNA.333-201ENST00000365274 102 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA3P32297 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 RPS7P9-201ENST00000414704 586 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA3P32297 HSFY4P-201ENST00000415994 1181 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC012065.2-201ENST00000421295 375 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 DUTP6-201ENST00000425573 462 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA3P32297 MTCYBP31-201ENST00000438855 1122 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA3P32297 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA3P32297 AL031313.1-201ENST00000448435 256 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AL445669.2-201ENST00000454425 421 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC092754.2-201ENST00000463506 460 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC013828.1-201ENST00000481845 158 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AL358832.1-201ENST00000497800 389 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC114967.1-201ENST00000504890 259 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC105914.1-201ENST00000511798 226 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 IGKV2-26-201ENST00000518305 343 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC126177.3-201ENST00000551839 688 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.5□□□□□ -1.85
CHRNA3P32297 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA3P32297 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC010738.1-201ENST00000604970 987 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.5□□□□□ -1.85
CHRNA3P32297 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 AC092954.1-201ENST00000609121 445 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC063944.3-201ENST00000609969 533 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 SNORD39.4-201ENST00000620099 78 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC068787.1-201ENST00000623908 691 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 CYP3A51P-201ENST00000633513 256 ntBASIC3.5□□□□□ -1.85
CHRNA3P32297 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CHRNA3P32297 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA3P32297 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA3P32297 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms