Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC13P31276 RNA5SP208-201ENST00000516156 78 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 RNU6-1261P-201ENST00000517194 104 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXC13P31276 OR5B10P-201ENST00000532869 642 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 AC008127.2-201ENST00000549925 1075 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC13P31276 AL389895.1-201ENST00000554127 252 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC13P31276 MTCYBP33-201ENST00000575007 1130 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HOXC13P31276 MIR5187-201ENST00000583479 76 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 AC022022.2-201ENST00000602989 360 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 RNU1-30P-201ENST00000606575 163 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC13P31276 AC231759.1-201ENST00000616455 597 ntBASIC3.91□□□□□ -1.78
HOXC13P31276 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXC13P31276 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC13P31276 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC13P31276 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC13P31276 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HOXC13P31276 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.9□□□□□ -1.78
HOXC13P31276 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.9□□□□□ -1.78
HOXC13P31276 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.9□□□□□ -1.78
HOXC13P31276 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
HOXC13P31276 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
HOXC13P31276 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.9□□□□□ -1.78
HOXC13P31276 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXC13P31276 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
HOXC13P31276 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HOXC13P31276 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC13P31276 Y_RNA.25-201ENST00000362528 102 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 SNORA48.2-201ENST00000390926 124 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 RNU6-712P-201ENST00000410558 100 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 Z92545.1-201ENST00000411782 234 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC13P31276 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXC13P31276 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 MRPS36P1-201ENST00000421291 307 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AL049610.1-201ENST00000423374 372 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 XKRYP1-201ENST00000423438 492 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC13P31276 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 XKRYP2-201ENST00000432915 492 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC13P31276 MUPP-201ENST00000438111 566 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 CYCSP32-201ENST00000440548 321 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 OR6K5P-201ENST00000447050 945 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC112492.1-201ENST00000449607 712 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC020699.1-201ENST00000505161 445 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 BTF3L4P4-201ENST00000506381 449 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 SUMO2P20-201ENST00000520803 283 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC13P31276 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 OSBPL9P5-201ENST00000542581 171 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC107016.1-201ENST00000550463 337 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC13P31276 TRAV15-201ENST00000556680 249 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC13P31276 AL360157.1-201ENST00000565962 87 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC145350.1-201ENST00000567426 208 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC138915.2-201ENST00000569776 97 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXC13P31276 AC245036.5-201ENST00000596330 847 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC021749.1-201ENST00000604322 607 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC010738.1-201ENST00000604970 987 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AL365400.2-201ENST00000605604 902 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AC069545.1-201ENST00000605671 358 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 U3.45-201ENST00000607547 219 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC13P31276 AL110115.1-201ENST00000614396 364 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AL355810.1-201ENST00000614629 552 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 AP003485.2-201ENST00000623636 610 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC13P31276 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 MKKS-204ENST00000639674 192 ntBASIC3.9□□□□□ -1.79
HOXC13P31276 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC13P31276 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC13P31276 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC13P31276 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 AL049780.3-201ENST00000624612 1583 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC13P31276 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 SNORD116-12-201ENST00000384468 92 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC016769.3-201ENST00000396562 315 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 CYCSP45-201ENST00000402289 315 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms