Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.02□□□□□ -1.45
VARSP26640 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.02□□□□□ -1.45
VARSP26640 AC012119.1-201ENST00000603184 222 ntBASIC6.02□□□□□ -1.45
VARSP26640 AP001823.1-201ENST00000604056 1003 ntBASIC6.02□□□□□ -1.45
VARSP26640 AC025588.3-201ENST00000604182 274 ntBASIC6.02□□□□□ -1.45
VARSP26640 AC124916.2-201ENST00000604416 224 ntBASIC6.02□□□□□ -1.45
VARSP26640 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.02□□□□□ -1.45
VARSP26640 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.02□□□□□ -1.45
VARSP26640 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
VARSP26640 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.02□□□□□ -1.45
VARSP26640 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.01□□□□□ -1.45
VARSP26640 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.01□□□□□ -1.45
VARSP26640 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
VARSP26640 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
VARSP26640 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.01□□□□□ -1.45
VARSP26640 ADAM24P-201ENST00000398655 2101 ntBASIC6.01□□□□□ -1.45
VARSP26640 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VARSP26640 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 RNU1-49P-201ENST00000363468 159 ntBASIC6.01□□□□□ -1.45
VARSP26640 RNA5SP346-201ENST00000363541 121 ntBASIC6.01□□□□□ -1.45
VARSP26640 RN7SKP81-201ENST00000365603 331 ntBASIC6.01□□□□□ -1.45
VARSP26640 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VARSP26640 RN7SKP151-201ENST00000410230 316 ntBASIC6.01□□□□□ -1.45
VARSP26640 AC015977.1-201ENST00000418887 292 ntBASIC6.01□□□□□ -1.45
VARSP26640 AL354766.1-201ENST00000423396 542 ntBASIC6.01□□□□□ -1.45
VARSP26640 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.01□□□□□ -1.45
VARSP26640 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.01□□□□□ -1.45
VARSP26640 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.01□□□□□ -1.45
VARSP26640 AL591704.1-201ENST00000432574 275 ntBASIC6.01□□□□□ -1.45
VARSP26640 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.01□□□□□ -1.45
VARSP26640 AC068228.1-201ENST00000461723 211 ntBASIC6.01□□□□□ -1.45
VARSP26640 AC091180.1-201ENST00000462104 372 ntBASIC6.01□□□□□ -1.45
VARSP26640 AL035690.1-201ENST00000490892 383 ntBASIC6.01□□□□□ -1.45
VARSP26640 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.01□□□□□ -1.45
VARSP26640 Y_RNA.689-201ENST00000516589 107 ntBASIC6.01□□□□□ -1.45
VARSP26640 AC100870.1-201ENST00000522035 505 ntBASIC6.01□□□□□ -1.45
VARSP26640 AC036111.2-201ENST00000533247 901 ntBASIC6.01□□□□□ -1.45
VARSP26640 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.01□□□□□ -1.45
VARSP26640 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
VARSP26640 TXNP4-201ENST00000575018 310 ntBASIC6.01□□□□□ -1.45
VARSP26640 NPIPB1P-202ENST00000588786 828 ntBASIC6.01□□□□□ -1.45
VARSP26640 AC006363.1-201ENST00000603806 463 ntBASIC6.01□□□□□ -1.45
VARSP26640 SNHG22-203ENST00000617833 660 ntBASIC6.01□□□□□ -1.45
VARSP26640 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.01□□□□□ -1.45
VARSP26640 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.01□□□□□ -1.45
VARSP26640 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VARSP26640 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VARSP26640 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.01□□□□□ -1.45
VARSP26640 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARSP26640 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.01□□□□□ -1.45
VARSP26640 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.01□□□□□ -1.45
VARSP26640 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6□□□□□ -1.45
VARSP26640 AC006484.1-201ENST00000435086 1884 ntBASIC6□□□□□ -1.45
VARSP26640 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6□□□□□ -1.45
VARSP26640 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6□□□□□ -1.45
VARSP26640 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6□□□□□ -1.45
VARSP26640 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
VARSP26640 ERVFRD-3-201ENST00000578561 1617 ntBASIC6□□□□□ -1.45
VARSP26640 PARP4P2-201ENST00000446672 3326 ntBASIC6□□□□□ -1.45
VARSP26640 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6□□□□□ -1.45
VARSP26640 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6□□□□□ -1.45
VARSP26640 COX6B1P3-201ENST00000312310 260 ntBASIC6□□□□□ -1.45
VARSP26640 Y_RNA.122-201ENST00000363331 96 ntBASIC6□□□□□ -1.45
VARSP26640 SNORA43.1-201ENST00000364863 140 ntBASIC6□□□□□ -1.45
VARSP26640 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6□□□□□ -1.45
VARSP26640 RNU1-74P-201ENST00000384108 171 ntBASIC6□□□□□ -1.45
VARSP26640 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6□□□□□ -1.45
VARSP26640 RNU6-754P-201ENST00000391166 107 ntBASIC6□□□□□ -1.45
VARSP26640 GCNT1P4-201ENST00000404096 329 ntBASIC6□□□□□ -1.45
VARSP26640 RN7SKP206-201ENST00000410823 293 ntBASIC6□□□□□ -1.45
VARSP26640 HMGN1P20-201ENST00000411849 300 ntBASIC6□□□□□ -1.45
VARSP26640 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6□□□□□ -1.45
VARSP26640 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6□□□□□ -1.45
VARSP26640 RPL29P29-201ENST00000448725 423 ntBASIC6□□□□□ -1.45
VARSP26640 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 RNU7-120P-201ENST00000459334 63 ntBASIC6□□□□□ -1.45
VARSP26640 RPS29P26-201ENST00000477483 171 ntBASIC6□□□□□ -1.45
VARSP26640 LSM3P4-201ENST00000502948 309 ntBASIC6□□□□□ -1.45
VARSP26640 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms