Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC117522.1-201ENST00000509821 380 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 IGKV1-32-201ENST00000519290 311 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 AF235103.2-201ENST00000525753 346 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 DYNLL1P4-201ENST00000549314 266 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC3P19447 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.75□□□□□ -1.49
ERCC3P19447 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.75□□□□□ -1.49
ERCC3P19447 AC127024.5-201ENST00000580085 462 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 SNORD84-203ENST00000584275 78 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 PRPF19P1-201ENST00000584766 898 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.75□□□□□ -1.49
ERCC3P19447 AC020910.3-201ENST00000603701 874 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 AC008945.2-201ENST00000606056 604 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 MIR6839-201ENST00000620425 113 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
ERCC3P19447 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 Z95331.1-201ENST00000623075 23112 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ERCC3P19447 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC3P19447 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC3P19447 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC3P19447 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 AC126755.2-208ENST00000327792 462 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AC138969.1-213ENST00000331436 462 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 RNU6-1155P-201ENST00000363554 107 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 SNORA62.1-201ENST00000364287 154 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 AL356776.1-201ENST00000406574 447 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 RNU6-1068P-201ENST00000410958 103 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 RN7SKP100-201ENST00000411258 284 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC3P19447 RPL23AP38-201ENST00000423801 469 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 ZNF863P-201ENST00000426746 417 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 OR2AS1P-201ENST00000427827 319 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 MED13P1-201ENST00000428342 171 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC3P19447 USP12PX-201ENST00000432383 1057 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AC091390.1-201ENST00000433904 331 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC3P19447 AC005094.1-201ENST00000440420 368 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC3P19447 DDX3P2-201ENST00000446138 111 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC3P19447 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC3P19447 AC008481.1-201ENST00000463278 396 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
ERCC3P19447 HSPD1P15-201ENST00000505573 1122 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AC114786.4-201ENST00000508771 728 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 LRRC34P2-201ENST00000514850 553 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 RNU6-507P-201ENST00000516045 100 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 SNORA20.3-201ENST00000516880 132 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.74□□□□□ -1.49
ERCC3P19447 OR5B10P-201ENST00000532869 642 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AC027369.5-201ENST00000533838 755 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 CBX3P5-201ENST00000552017 521 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC3P19447 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC3P19447 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC3P19447 AP001029.3-201ENST00000588063 596 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC3P19447 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC3P19447 TUG1_2.1-201ENST00000614234 87 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 AL450472.3-201ENST00000615578 367 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC3P19447 AC024614.3-201ENST00000637860 256 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ERCC3P19447 GABPAP-201ENST00000419271 1356 ntBASIC5.74□□□□□ -1.49
ERCC3P19447 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC3P19447 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC3P19447 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC3P19447 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 AC022893.2-201ENST00000564832 3296 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.73□□□□□ -1.49
ERCC3P19447 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
ERCC3P19447 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.73□□□□□ -1.49
ERCC3P19447 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.73□□□□□ -1.49
ERCC3P19447 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ERCC3P19447 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC3P19447 RNU6-511P-201ENST00000363496 107 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 RNY3P3-201ENST00000363816 102 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 RNU6-996P-201ENST00000365438 107 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 RNU4-48P-201ENST00000365559 182 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 RNU2-43P-201ENST00000410306 190 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 OR51A5P-201ENST00000415429 942 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 C4BPAP2-201ENST00000428434 478 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 DNAJC19P7-201ENST00000428811 344 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 AC009238.2-201ENST00000431026 355 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms