Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RN7SKP159-201ENST00000410657 292 ntBASIC4.39□□□□□ -1.71
RHOP08100 MTCO1P17-201ENST00000411522 491 ntBASIC4.39□□□□□ -1.71
RHOP08100 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.39□□□□□ -1.71
RHOP08100 AL138785.1-201ENST00000425821 331 ntBASIC4.39□□□□□ -1.71
RHOP08100 NANOGP6-201ENST00000429190 847 ntBASIC4.39□□□□□ -1.71
RHOP08100 HMGB1P31-201ENST00000437242 427 ntBASIC4.39□□□□□ -1.71
RHOP08100 AC112653.1-201ENST00000443851 386 ntBASIC4.39□□□□□ -1.71
RHOP08100 AC108751.2-201ENST00000469993 231 ntBASIC4.39□□□□□ -1.71
RHOP08100 AC104563.1-201ENST00000476147 376 ntBASIC4.39□□□□□ -1.71
RHOP08100 AC005726.1-201ENST00000494679 427 ntBASIC4.39□□□□□ -1.71
RHOP08100 AC010342.1-201ENST00000514047 877 ntBASIC4.39□□□□□ -1.71
RHOP08100 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.39□□□□□ -1.71
RHOP08100 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.39□□□□□ -1.71
RHOP08100 AP001893.2-201ENST00000526949 202 ntBASIC4.39□□□□□ -1.71
RHOP08100 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.39□□□□□ -1.71
RHOP08100 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
RHOP08100 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.39□□□□□ -1.71
RHOP08100 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.39□□□□□ -1.71
RHOP08100 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.39□□□□□ -1.71
RHOP08100 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.39□□□□□ -1.71
RHOP08100 DUXAP9-208ENST00000622815 614 ntBASIC4.39□□□□□ -1.71
RHOP08100 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.39□□□□□ -1.71
RHOP08100 MIR6863-201ENST00000636112 90 ntBASIC4.39□□□□□ -1.71
RHOP08100 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHOP08100 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHOP08100 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHOP08100 AC011978.2-201ENST00000569835 2054 ntBASIC4.39□□□□□ -1.71
RHOP08100 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHOP08100 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RHOP08100 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 CCT4P2-201ENST00000233836 1548 ntBASIC4.38□□□□□ -1.71
RHOP08100 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.38□□□□□ -1.71
RHOP08100 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RHOP08100 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 U8.3-201ENST00000363321 132 ntBASIC4.38□□□□□ -1.71
RHOP08100 RNY4P14-201ENST00000363656 96 ntBASIC4.38□□□□□ -1.71
RHOP08100 RNU6-343P-201ENST00000364709 104 ntBASIC4.38□□□□□ -1.71
RHOP08100 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 RNU6-1103P-201ENST00000384150 107 ntBASIC4.38□□□□□ -1.71
RHOP08100 RNU6-114P-201ENST00000384704 105 ntBASIC4.38□□□□□ -1.71
RHOP08100 SNORD66.1-201ENST00000391230 76 ntBASIC4.38□□□□□ -1.71
RHOP08100 AL024474.1-201ENST00000404655 591 ntBASIC4.38□□□□□ -1.71
RHOP08100 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.38□□□□□ -1.71
RHOP08100 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.38□□□□□ -1.71
RHOP08100 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.38□□□□□ -1.71
RHOP08100 AL671855.1-201ENST00000446875 1203 ntBASIC4.38□□□□□ -1.71
RHOP08100 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 BX322784.1-201ENST00000455793 1077 ntBASIC4.38□□□□□ -1.71
RHOP08100 AC034236.1-201ENST00000469891 373 ntBASIC4.38□□□□□ -1.71
RHOP08100 AC023598.1-201ENST00000472521 361 ntBASIC4.38□□□□□ -1.71
RHOP08100 AC087879.1-201ENST00000474343 374 ntBASIC4.38□□□□□ -1.71
RHOP08100 RPL30P11-201ENST00000495304 339 ntBASIC4.38□□□□□ -1.71
RHOP08100 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 IFITM8P-201ENST00000522529 394 ntBASIC4.38□□□□□ -1.71
RHOP08100 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.38□□□□□ -1.71
RHOP08100 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.38□□□□□ -1.71
RHOP08100 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.38□□□□□ -1.71
RHOP08100 AL121579.1-201ENST00000555129 305 ntBASIC4.38□□□□□ -1.71
RHOP08100 AC022655.2-201ENST00000577280 318 ntBASIC4.38□□□□□ -1.71
RHOP08100 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.38□□□□□ -1.71
RHOP08100 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 AC069234.5-201ENST00000611056 416 ntBASIC4.38□□□□□ -1.71
RHOP08100 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 AC092794.2-201ENST00000620933 563 ntBASIC4.38□□□□□ -1.71
RHOP08100 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.38□□□□□ -1.71
RHOP08100 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
RHOP08100 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHOP08100 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RHOP08100 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.38□□□□□ -1.71
RHOP08100 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
RHOP08100 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHOP08100 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.37□□□□□ -1.71
RHOP08100 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.37□□□□□ -1.71
RHOP08100 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHOP08100 MTND5P28-201ENST00000438005 1594 ntBASIC4.37□□□□□ -1.71
RHOP08100 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.37□□□□□ -1.71
RHOP08100 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms