Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQB2P05538 AC104332.2-201ENST00000429959 156 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQB2P05538 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQB2P05538 RPL17P49-201ENST00000443728 411 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 MRPL35P4-201ENST00000453682 566 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 AL024509.2-201ENST00000493462 493 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQB2P05538 RNU4-29P-201ENST00000515943 174 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 RNU6-711P-201ENST00000517255 106 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
HLA-DQB2P05538 AC078899.3-201ENST00000599065 212 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQB2P05538 AC131902.3-201ENST00000611767 581 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQB2P05538 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DQB2P05538 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQB2P05538 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQB2P05538 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DQB2P05538 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQB2P05538 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC103988.1-201ENST00000566382 2177 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 FTLP6-201ENST00000355274 422 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 RNA5SP68-201ENST00000363885 119 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 MTCO2P17-201ENST00000424336 677 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 RPS7P2-201ENST00000435134 607 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 MTCO1P31-201ENST00000506355 492 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 RNU6-826P-201ENST00000516827 104 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 HMGB1P41-201ENST00000520234 440 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 UBTFL10-201ENST00000528532 562 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 NOP56P3-201ENST00000549457 385 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AL442163.2-201ENST00000553912 710 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 CKS1BP1-201ENST00000555221 240 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC107954.1-201ENST00000565906 727 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC234778.2-201ENST00000566241 354 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 OR4G1P-201ENST00000588632 938 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AF131215.7-201ENST00000602443 707 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AL160237.3-201ENST00000604114 1013 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AC090617.7-201ENST00000623952 126 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 CUL1P1-201ENST00000509510 2425 ntBASIC2.52□□□□□ -2.01
HLA-DQB2P05538 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQB2P05538 AP002907.1-201ENST00000606361 1430 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AC016716.1-201ENST00000265882 708 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 DEFB109C-201ENST00000382575 264 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 DEFB109B-201ENST00000382656 264 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AL031679.1-201ENST00000400616 525 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 FCF1P1-201ENST00000432690 571 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AC008885.2-201ENST00000509506 930 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 TBCAP3-201ENST00000512475 312 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 MTCO2P32-201ENST00000514865 403 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 SNORD59.2-201ENST00000516873 68 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 RNU6-56P-201ENST00000516986 93 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 C1DP5-201ENST00000525775 383 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 CR589904.2-201ENST00000612533 440 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AC009032.1-201ENST00000617574 431 ntBASIC2.51□□□□□ -2.01
HLA-DQB2P05538 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DQB2P05538 AC006963.1-201ENST00000624003 1052 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms