Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL450472.3-201ENST00000615578 367 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFAP04085 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 AC011755.1-201ENST00000623763 2049 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFAP04085 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 AC092747.4-201ENST00000620519 1861 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFAP04085 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFAP04085 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFAP04085 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
PDGFAP04085 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFAP04085 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PDGFAP04085 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFAP04085 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFAP04085 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFAP04085 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDGFAP04085 RNU6-490P-201ENST00000362985 107 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 Y_RNA.80-201ENST00000362996 102 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 RNU6-214P-201ENST00000384130 107 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 SNORA70E-201ENST00000384492 135 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 Y_RNA.527-201ENST00000384573 102 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 GLULP6-201ENST00000399502 913 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 RPL21P67-201ENST00000402896 478 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFAP04085 RNU4-6P-201ENST00000410804 122 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFAP04085 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFAP04085 RPL7P37-201ENST00000425095 738 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFAP04085 AC073410.1-201ENST00000435125 589 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFAP04085 AC008264.1-201ENST00000447612 367 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 DHFRP3-201ENST00000455595 559 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 RNU6-953P-201ENST00000459154 107 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 RPS17P15-201ENST00000475609 349 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 RPL21P103-201ENST00000479921 488 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC022215.1-201ENST00000481770 362 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC017037.1-201ENST00000508460 471 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC021146.3-201ENST00000511911 260 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFAP04085 Y_RNA.670-201ENST00000516255 105 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 RN7SKP60-201ENST00000516985 239 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC090151.1-201ENST00000520784 730 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC022360.1-201ENST00000521058 340 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AP002404.1-201ENST00000532005 451 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC026371.1-201ENST00000551867 419 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AL049872.1-201ENST00000556323 322 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFAP04085 AC119403.2-201ENST00000590960 598 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 FKBP1AP1-201ENST00000594588 318 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC007619.2-201ENST00000605743 379 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 AC004696.1-201ENST00000614345 607 ntBASIC5.4□□□□□ -1.54
PDGFAP04085 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PDGFAP04085 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFAP04085 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFAP04085 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
PDGFAP04085 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PDGFAP04085 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFAP04085 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFAP04085 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFAP04085 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.4□□□□□ -1.55
PDGFAP04085 SRRM1P3-201ENST00000426911 2678 ntBASIC5.4□□□□□ -1.55
PDGFAP04085 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.4□□□□□ -1.55
PDGFAP04085 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.4□□□□□ -1.55
PDGFAP04085 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PDGFAP04085 EIF2AP4-201ENST00000424793 1781 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PDGFAP04085 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PDGFAP04085 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PDGFAP04085 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFAP04085 Y_RNA.47-201ENST00000362697 108 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 Y_RNA.176-201ENST00000363815 109 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 Y_RNA.193-201ENST00000363979 102 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 Y_RNA.404-201ENST00000383978 102 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 RNY1P14-201ENST00000384426 108 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 RNU6-293P-201ENST00000411259 106 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFAP04085 RPS4XP5-201ENST00000419038 768 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 AC096644.2-201ENST00000429278 159 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 HIGD1AP11-201ENST00000438361 280 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFAP04085 AL359672.1-201ENST00000442302 409 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 H2AFZP6-201ENST00000444403 394 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 RN7SL826P-201ENST00000479724 288 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 AC096745.1-201ENST00000509945 370 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 RNU6-794P-201ENST00000517261 64 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.39□□□□□ -1.55
PDGFAP04085 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFAP04085 AL161670.1-201ENST00000554348 137 ntBASIC5.39□□□□□ -1.55
PDGFAP04085 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFAP04085 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFAP04085 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms