Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC006329.2-201ENST00000611491 394 ntBASIC2.85□□□□□ -1.95
VAPBO95292 GABRG2-229ENST00000641017 3628 ntBASIC2.85□□□□□ -1.95
VAPBO95292 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAPBO95292 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAPBO95292 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.95
VAPBO95292 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPBO95292 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VAPBO95292 AL355596.1-201ENST00000565399 3996 ntBASIC2.84□□□□□ -1.95
VAPBO95292 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.84□□□□□ -1.95
VAPBO95292 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPBO95292 AC092447.7-201ENST00000422212 1621 ntBASIC2.84□□□□□ -1.95
VAPBO95292 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
VAPBO95292 RNU6-921P-201ENST00000384361 107 ntBASIC2.84□□□□□ -1.95
VAPBO95292 RNU6-1005P-201ENST00000384519 107 ntBASIC2.84□□□□□ -1.95
VAPBO95292 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VAPBO95292 MTND4LP20-201ENST00000402379 270 ntBASIC2.84□□□□□ -1.95
VAPBO95292 ATF1P1-201ENST00000406040 927 ntBASIC2.84□□□□□ -1.95
VAPBO95292 FAT1P1-201ENST00000406588 507 ntBASIC2.84□□□□□ -1.95
VAPBO95292 RNU6-77P-201ENST00000410554 91 ntBASIC2.84□□□□□ -1.95
VAPBO95292 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPBO95292 UBE2D3P2-201ENST00000424409 445 ntBASIC2.84□□□□□ -1.95
VAPBO95292 AL035410.1-201ENST00000427409 427 ntBASIC2.84□□□□□ -1.95
VAPBO95292 RPS20P5-201ENST00000434808 360 ntBASIC2.84□□□□□ -1.95
VAPBO95292 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPBO95292 AC104073.1-201ENST00000451988 151 ntBASIC2.84□□□□□ -1.95
VAPBO95292 NIPA2P5-201ENST00000452282 464 ntBASIC2.84□□□□□ -1.95
VAPBO95292 RPL23AP31-201ENST00000456160 467 ntBASIC2.84□□□□□ -1.95
VAPBO95292 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPBO95292 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPBO95292 RNA5SP310-201ENST00000459084 116 ntBASIC2.84□□□□□ -1.95
VAPBO95292 AL136126.1-201ENST00000473603 402 ntBASIC2.84□□□□□ -1.95
VAPBO95292 RPL23AP11-201ENST00000475260 469 ntBASIC2.84□□□□□ -1.95
VAPBO95292 AC083906.5-201ENST00000503722 328 ntBASIC2.84□□□□□ -1.95
VAPBO95292 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.84□□□□□ -1.95
VAPBO95292 SNORA31.8-201ENST00000516327 108 ntBASIC2.84□□□□□ -1.95
VAPBO95292 RN7SKP57-201ENST00000517248 293 ntBASIC2.84□□□□□ -1.95
VAPBO95292 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.84□□□□□ -1.95
VAPBO95292 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.84□□□□□ -1.95
VAPBO95292 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPBO95292 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.84□□□□□ -1.95
VAPBO95292 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPBO95292 AC126177.3-201ENST00000551839 688 ntBASIC2.84□□□□□ -1.95
VAPBO95292 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPBO95292 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPBO95292 AC006504.3-201ENST00000586818 523 ntBASIC2.84□□□□□ -1.95
VAPBO95292 AC106791.2-201ENST00000604680 391 ntBASIC2.84□□□□□ -1.95
VAPBO95292 AC091046.2-201ENST00000620775 665 ntBASIC2.84□□□□□ -1.95
VAPBO95292 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
VAPBO95292 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VAPBO95292 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.84□□□□□ -1.96
VAPBO95292 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.84□□□□□ -1.96
VAPBO95292 AP003122.5-201ENST00000527668 3766 ntBASIC2.84□□□□□ -1.96
VAPBO95292 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VAPBO95292 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.83□□□□□ -1.96
VAPBO95292 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.83□□□□□ -1.96
VAPBO95292 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VAPBO95292 SNORD46.1-201ENST00000364139 104 ntBASIC2.83□□□□□ -1.96
VAPBO95292 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VAPBO95292 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPBO95292 RNU6-712P-201ENST00000410558 100 ntBASIC2.83□□□□□ -1.96
VAPBO95292 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPBO95292 USP9YP36-201ENST00000424581 829 ntBASIC2.83□□□□□ -1.96
VAPBO95292 RPL35AP12-201ENST00000425362 338 ntBASIC2.83□□□□□ -1.96
VAPBO95292 AL451062.2-201ENST00000427515 271 ntBASIC2.83□□□□□ -1.96
VAPBO95292 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.83□□□□□ -1.96
VAPBO95292 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPBO95292 AC093156.1-201ENST00000440382 670 ntBASIC2.83□□□□□ -1.96
VAPBO95292 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPBO95292 RSL24D1P2-201ENST00000445584 366 ntBASIC2.83□□□□□ -1.96
VAPBO95292 GSTA11P-201ENST00000452866 669 ntBASIC2.83□□□□□ -1.96
VAPBO95292 AC003982.1-202ENST00000469928 248 ntBASIC2.83□□□□□ -1.96
VAPBO95292 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.83□□□□□ -1.96
VAPBO95292 AC026412.2-201ENST00000512270 1075 ntBASIC2.83□□□□□ -1.96
VAPBO95292 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPBO95292 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPBO95292 AL157394.1-201ENST00000562983 1224 ntBASIC2.83□□□□□ -1.96
VAPBO95292 KATNBL1P1-201ENST00000605192 748 ntBASIC2.83□□□□□ -1.96
VAPBO95292 AC131902.3-201ENST00000611767 581 ntBASIC2.83□□□□□ -1.96
VAPBO95292 AL162274.2-201ENST00000614406 332 ntBASIC2.83□□□□□ -1.96
VAPBO95292 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VAPBO95292 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VAPBO95292 AC111188.2-201ENST00000529697 1387 ntBASIC2.83□□□□□ -1.96
VAPBO95292 AC096644.4-201ENST00000563417 2912 ntBASIC2.82□□□□□ -1.96
VAPBO95292 SNORA14A-201ENST00000364773 135 ntBASIC2.82□□□□□ -1.96
VAPBO95292 RNU6-1074P-201ENST00000383995 104 ntBASIC2.82□□□□□ -1.96
VAPBO95292 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
VAPBO95292 SNORA11-201ENST00000408789 128 ntBASIC2.82□□□□□ -1.96
VAPBO95292 SSXP9-201ENST00000417503 292 ntBASIC2.82□□□□□ -1.96
VAPBO95292 MUPP-201ENST00000438111 566 ntBASIC2.82□□□□□ -1.96
VAPBO95292 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.82□□□□□ -1.96
VAPBO95292 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.82□□□□□ -1.96
VAPBO95292 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.82□□□□□ -1.96
VAPBO95292 RPS29P26-201ENST00000477483 171 ntBASIC2.82□□□□□ -1.96
VAPBO95292 RPL30P14-201ENST00000482744 348 ntBASIC2.82□□□□□ -1.96
VAPBO95292 RPL9P33-201ENST00000484311 566 ntBASIC2.82□□□□□ -1.96
VAPBO95292 KLHL2P1-201ENST00000508691 521 ntBASIC2.82□□□□□ -1.96
VAPBO95292 SCARNA13-201ENST00000516672 275 ntBASIC2.82□□□□□ -1.96
VAPBO95292 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.82□□□□□ -1.96
VAPBO95292 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.82□□□□□ -1.96
VAPBO95292 IGJP1-201ENST00000522682 475 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms