Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.45□□□□□ -1.54
VAMP4O75379 CALM1P1-201ENST00000442082 433 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.45□□□□□ -1.54
VAMP4O75379 UQCRHP4-201ENST00000471686 272 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 AC104563.1-201ENST00000476147 376 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.45□□□□□ -1.54
VAMP4O75379 MTND3P22-201ENST00000510932 243 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 AC099522.1-202ENST00000514718 367 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.45□□□□□ -1.54
VAMP4O75379 Y_RNA.704-201ENST00000516851 102 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
VAMP4O75379 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VAMP4O75379 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VAMP4O75379 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.45□□□□□ -1.54
VAMP4O75379 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.45□□□□□ -1.54
VAMP4O75379 LARP7P2-201ENST00000575306 125 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.45□□□□□ -1.54
VAMP4O75379 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.45□□□□□ -1.54
VAMP4O75379 NRBF2P5-201ENST00000603087 788 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 AC128687.2-201ENST00000609657 566 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.45□□□□□ -1.54
VAMP4O75379 AC010133.1-201ENST00000615809 842 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VAMP4O75379 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VAMP4O75379 AL133243.3-201ENST00000617415 3004 ntBASIC5.45□□□□□ -1.54
VAMP4O75379 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VAMP4O75379 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VAMP4O75379 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VAMP4O75379 ERCC6-202ENST00000374127 1782 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VAMP4O75379 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VAMP4O75379 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VAMP4O75379 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.44□□□□□ -1.54
VAMP4O75379 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VAMP4O75379 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.44□□□□□ -1.54
VAMP4O75379 RNU6-1011P-201ENST00000384668 107 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 MT-TD-201ENST00000387419 68 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.44□□□□□ -1.54
VAMP4O75379 AL161631.1-201ENST00000417933 486 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.44□□□□□ -1.54
VAMP4O75379 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.44□□□□□ -1.54
VAMP4O75379 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.44□□□□□ -1.54
VAMP4O75379 RPS26P56-201ENST00000444468 240 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 HMGN1P12-201ENST00000499125 195 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 RNF138P1-201ENST00000502765 546 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 PARP4P3-201ENST00000510265 317 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 MTCO1P35-201ENST00000515270 228 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 AP003181.2-201ENST00000528941 181 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.44□□□□□ -1.54
VAMP4O75379 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.44□□□□□ -1.54
VAMP4O75379 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.44□□□□□ -1.54
VAMP4O75379 LSM6P2-201ENST00000552208 177 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.44□□□□□ -1.54
VAMP4O75379 AC107954.1-201ENST00000565906 727 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 PSMA6P4-201ENST00000603247 718 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AC011468.4-201ENST00000603942 409 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AL121757.2-201ENST00000611223 313 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AP006248.2-201ENST00000623309 592 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AL359697.1-201ENST00000624879 587 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.44□□□□□ -1.54
VAMP4O75379 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VAMP4O75379 AL445437.1-201ENST00000623157 3087 ntBASIC5.44□□□□□ -1.54
VAMP4O75379 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAMP4O75379 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAMP4O75379 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.43□□□□□ -1.54
VAMP4O75379 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAMP4O75379 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
VAMP4O75379 AL049780.3-201ENST00000624612 1583 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 AC092326.2-201ENST00000624772 1561 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.43□□□□□ -1.54
VAMP4O75379 Y_RNA.46-201ENST00000362695 102 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 Y_RNA.160-201ENST00000363677 92 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 RNU6-730P-201ENST00000383954 104 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 AL031679.1-201ENST00000400616 525 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 AL023807.1-201ENST00000407932 359 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.43□□□□□ -1.54
VAMP4O75379 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.43□□□□□ -1.54
VAMP4O75379 RBMY1KP-201ENST00000423480 476 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 NPM1P24-201ENST00000428039 894 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.43□□□□□ -1.54
VAMP4O75379 FAM103A2P-201ENST00000444122 354 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.43□□□□□ -1.54
VAMP4O75379 AC002381.1-201ENST00000447049 280 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 MTND1P12-201ENST00000455231 147 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.43□□□□□ -1.54
VAMP4O75379 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.43□□□□□ -1.54
VAMP4O75379 AC023194.1-201ENST00000493084 308 ntBASIC5.43□□□□□ -1.54
VAMP4O75379 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.43□□□□□ -1.54
VAMP4O75379 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.43□□□□□ -1.54
VAMP4O75379 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VAMP4O75379 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms