Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 RNA5SP319-201ENST00000362768 119 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 RNU4-56P-201ENST00000364700 142 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 RNU6-573P-201ENST00000383938 106 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 RNU4-30P-201ENST00000410245 143 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 RNU2-2P-201ENST00000410396 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 AL133384.1-201ENST00000412744 351 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 AL096829.1-201ENST00000413677 457 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 CYP4F29P-201ENST00000420685 446 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.92□□□□□ -1.46
GFRA3O60609 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.92□□□□□ -1.46
GFRA3O60609 RPS7P3-201ENST00000443360 580 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 AC026826.1-201ENST00000493002 361 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.92□□□□□ -1.46
GFRA3O60609 AC134698.5-201ENST00000519444 336 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 HMGB1P42-201ENST00000532126 553 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 TRAV32-201ENST00000553993 340 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 RPL21P9-201ENST00000556149 474 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 AC090616.3-201ENST00000582184 217 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 MIR4293-201ENST00000584305 78 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA3O60609 RNU6-85P-201ENST00000605989 107 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 RNU2-4P-201ENST00000606190 192 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA3O60609 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.15-201ENST00000611544 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.16-201ENST00000613119 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.12-201ENST00000613778 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.9-201ENST00000615427 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.11-201ENST00000616345 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.2-201ENST00000616535 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.3-201ENST00000617785 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.19-201ENST00000618602 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 RNU2-1-201ENST00000618664 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.6-201ENST00000619225 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.5-201ENST00000619465 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 U2.10-201ENST00000620268 191 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 MIR7641-1-201ENST00000627518 61 ntBASIC5.92□□□□□ -1.46
GFRA3O60609 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
GFRA3O60609 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA3O60609 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA3O60609 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
GFRA3O60609 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.91□□□□□ -1.46
GFRA3O60609 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
GFRA3O60609 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
GFRA3O60609 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
GFRA3O60609 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA3O60609 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
GFRA3O60609 RNU6-989P-201ENST00000362756 107 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 RNU6-514P-201ENST00000384208 107 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 RNU6-921P-201ENST00000384361 107 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AC008171.1-201ENST00000395058 200 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AL139039.1-201ENST00000401900 692 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 MIR1204-201ENST00000408388 67 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 TMSB10P2-201ENST00000416049 131 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AL358176.3-201ENST00000420757 454 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA3O60609 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.91□□□□□ -1.46
GFRA3O60609 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.91□□□□□ -1.46
GFRA3O60609 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA3O60609 RNU7-197P-201ENST00000458836 62 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AC055872.1-201ENST00000570978 278 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AC068790.4-201ENST00000602474 263 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AC012119.1-201ENST00000603184 222 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AC005828.6-201ENST00000606610 232 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AL354718.1-201ENST00000619764 589 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 MIR3658-201ENST00000636291 56 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 AC068647.2-201ENST00000637380 353 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
GFRA3O60609 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 PARP4P2-201ENST00000446672 3326 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
GFRA3O60609 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA3O60609 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA3O60609 SPATA31C2-201ENST00000324915 3777 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 EXOC5P1-201ENST00000510543 1969 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 CASC19-228ENST00000641414 1684 ntBASIC5.91□□□□□ -1.46
GFRA3O60609 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
GFRA3O60609 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
GFRA3O60609 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA3O60609 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms