Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AL121871.1-201ENST00000443413 436 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 RPL7P36-201ENST00000444633 681 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 MTND1P11-201ENST00000456661 876 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 BTF3P5-201ENST00000457252 467 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SMARCA5O60264 AP000797.1-201ENST00000478870 387 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA5O60264 AC093278.1-201ENST00000494700 600 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA5O60264 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.5□□□□□ -1.53
SMARCA5O60264 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.5□□□□□ -1.53
SMARCA5O60264 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.5□□□□□ -1.53
SMARCA5O60264 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.5□□□□□ -1.53
SMARCA5O60264 RNU6-1153P-201ENST00000516760 105 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA5O60264 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.5□□□□□ -1.53
SMARCA5O60264 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SMARCA5O60264 CR383656.7-201ENST00000548164 174 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.5□□□□□ -1.53
SMARCA5O60264 AC044792.1-201ENST00000593294 196 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 AC233280.2-201ENST00000603917 1070 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 AC138649.5-201ENST00000637456 137 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA5O60264 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA5O60264 AC083843.3-201ENST00000623679 2186 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 MAPK10-303ENST00000641324 3959 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 AC006378.2-201ENST00000623178 2476 ntBASIC5.5□□□□□ -1.53
SMARCA5O60264 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMARCA5O60264 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMARCA5O60264 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMARCA5O60264 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SMARCA5O60264 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMARCA5O60264 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SMARCA5O60264 CBX3P1-201ENST00000325243 554 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 Y_RNA.9-201ENST00000362354 101 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 SNORA40.3-201ENST00000390964 122 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AL583835.1-201ENST00000399570 407 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AL049693.1-201ENST00000402760 611 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 RPL17P12-201ENST00000413391 526 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 CHIAP3-201ENST00000423668 1133 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.49□□□□□ -1.53
SMARCA5O60264 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.49□□□□□ -1.53
SMARCA5O60264 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.49□□□□□ -1.53
SMARCA5O60264 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.49□□□□□ -1.53
SMARCA5O60264 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.49□□□□□ -1.53
SMARCA5O60264 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.49□□□□□ -1.53
SMARCA5O60264 RPS20P32-201ENST00000456044 356 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 OR6K1P-201ENST00000456766 971 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AP000926.1-201ENST00000479573 241 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AC005921.1-201ENST00000510589 286 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.49□□□□□ -1.53
SMARCA5O60264 AC010342.1-201ENST00000514047 877 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 RNA5SP497-201ENST00000516081 97 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 RNU6-1095P-201ENST00000516148 108 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 SCARNA15.1-201ENST00000516384 125 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 RN7SKP92-201ENST00000517266 244 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.49□□□□□ -1.53
SMARCA5O60264 AK6P1-201ENST00000540219 478 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.49□□□□□ -1.53
SMARCA5O60264 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SMARCA5O60264 AL138976.2-201ENST00000563989 694 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.49□□□□□ -1.53
SMARCA5O60264 MIR544B-201ENST00000582372 78 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.49□□□□□ -1.53
SMARCA5O60264 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.49□□□□□ -1.53
SMARCA5O60264 VN1R79P-201ENST00000593540 513 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 RPL7P50-201ENST00000600588 727 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AC008745.1-201ENST00000604064 271 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 PRELID3BP8-201ENST00000604148 295 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SMARCA5O60264 C2orf27A-204ENST00000623058 969 ntBASIC5.49□□□□□ -1.53
SMARCA5O60264 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SMARCA5O60264 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMARCA5O60264 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SMARCA5O60264 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.49□□□□□ -1.53
SMARCA5O60264 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMARCA5O60264 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.49□□□□□ -1.53
SMARCA5O60264 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.48□□□□□ -1.53
SMARCA5O60264 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMARCA5O60264 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.48□□□□□ -1.53
SMARCA5O60264 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
SMARCA5O60264 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMARCA5O60264 XIAPP3-201ENST00000312918 795 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 RNA5SP189-201ENST00000364920 115 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 RNU6-116P-201ENST00000384042 109 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SMARCA5O60264 CALM2P3-201ENST00000400429 449 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 FCF1P10-201ENST00000407590 479 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 SNORA11B-201ENST00000408175 129 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 AC092447.6-201ENST00000414578 210 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.48□□□□□ -1.53
SMARCA5O60264 AC119751.6-201ENST00000416712 186 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.48□□□□□ -1.53
SMARCA5O60264 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.48□□□□□ -1.53
SMARCA5O60264 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.48□□□□□ -1.53
SMARCA5O60264 RPL37P21-201ENST00000435890 276 ntBASIC5.48□□□□□ -1.53
SMARCA5O60264 PSPHP1-201ENST00000450062 261 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms