Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.13□□□□□ -1.91
CHMP2AO43633 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
CHMP2AO43633 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
CHMP2AO43633 AC022690.1-201ENST00000526681 550 ntBASIC3.13□□□□□ -1.91
CHMP2AO43633 OR4A45P-201ENST00000529954 901 ntBASIC3.13□□□□□ -1.91
CHMP2AO43633 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP2AO43633 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP2AO43633 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.13□□□□□ -1.91
CHMP2AO43633 AC138761.3-201ENST00000579993 334 ntBASIC3.13□□□□□ -1.91
CHMP2AO43633 ZNF861P-201ENST00000588126 639 ntBASIC3.13□□□□□ -1.91
CHMP2AO43633 ATP1B3P1-201ENST00000605365 821 ntBASIC3.13□□□□□ -1.91
CHMP2AO43633 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.13□□□□□ -1.91
CHMP2AO43633 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP2AO43633 AC007998.5-201ENST00000622938 237 ntBASIC3.13□□□□□ -1.91
CHMP2AO43633 SCARNA15.3-201ENST00000626315 122 ntBASIC3.13□□□□□ -1.91
CHMP2AO43633 SCARNA4.1-201ENST00000628597 123 ntBASIC3.13□□□□□ -1.91
CHMP2AO43633 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CHMP2AO43633 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CHMP2AO43633 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP2AO43633 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP2AO43633 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.12□□□□□ -1.91
CHMP2AO43633 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP2AO43633 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AL138827.1-201ENST00000402666 306 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AL451074.5-201ENST00000415894 435 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 AL357078.2-201ENST00000416486 427 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 MTCO3P12-201ENST00000416718 547 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP2AO43633 FNDC3CP-201ENST00000420795 1155 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.12□□□□□ -1.91
CHMP2AO43633 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP2AO43633 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP2AO43633 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AC104108.1-201ENST00000509930 412 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AC239860.2-201ENST00000525886 270 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AC004217.3-201ENST00000551552 878 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.12□□□□□ -1.91
CHMP2AO43633 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP2AO43633 ELOCP29-201ENST00000588193 334 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 AC128687.1-201ENST00000605304 619 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 FRG1HP-204ENST00000617940 757 ntBASIC3.12□□□□□ -1.91
CHMP2AO43633 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.12□□□□□ -1.91
CHMP2AO43633 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHMP2AO43633 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP2AO43633 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP2AO43633 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP2AO43633 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CHMP2AO43633 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP2AO43633 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP2AO43633 ATF1P1-201ENST00000406040 927 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 RNU6-1077P-201ENST00000410506 102 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.11□□□□□ -1.91
CHMP2AO43633 RPP40P1-201ENST00000426762 456 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AC006548.1-201ENST00000427470 102 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 OR2B8P-201ENST00000432841 938 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.11□□□□□ -1.91
CHMP2AO43633 RPL21P8-201ENST00000465083 535 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 GAPDHP39-201ENST00000481866 979 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AC006483.1-201ENST00000487308 313 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 OR5H5P-201ENST00000503164 928 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.11□□□□□ -1.91
CHMP2AO43633 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 MIR4319-201ENST00000577285 85 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP2AO43633 AC006504.3-201ENST00000586818 523 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AP001029.3-201ENST00000588063 596 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AC096947.1-201ENST00000603233 470 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 AC073569.3-201ENST00000619055 682 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AC092650.2-201ENST00000619984 902 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AL118508.4-201ENST00000624142 1176 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 CR381572.1-201ENST00000625098 102 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP2AO43633 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP2AO43633 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP2AO43633 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP2AO43633 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
CHMP2AO43633 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHMP2AO43633 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.1□□□□□ -1.91
CHMP2AO43633 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHMP2AO43633 NDUFB4P5-201ENST00000415445 361 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP2AO43633 AC096632.1-201ENST00000427395 310 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms