Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN1O15353 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXN1O15353 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN1O15353 KCTD9P3-201ENST00000434597 1169 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 ELOCP26-201ENST00000436067 329 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN1O15353 AL022238.1-201ENST00000442557 355 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 AC007677.1-201ENST00000445757 515 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 PTMAP3-201ENST00000447474 330 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 MTND1P18-201ENST00000448191 573 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXN1O15353 ARPC3P2-201ENST00000457786 533 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXN1O15353 SNORD42A-201ENST00000459584 64 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 RBM43P1-201ENST00000476891 1081 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 AC106707.2-201ENST00000484182 374 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXN1O15353 RNU6-1225P-201ENST00000516336 65 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 Y_RNA.701-201ENST00000516812 110 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN1O15353 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN1O15353 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXN1O15353 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN1O15353 DUXAP4-201ENST00000603046 613 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 BNIP3P10-201ENST00000605360 577 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
FOXN1O15353 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXN1O15353 RLIMP2-201ENST00000427891 1563 ntBASIC4.82□□□□□ -1.64
FOXN1O15353 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN1O15353 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN1O15353 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
FOXN1O15353 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN1O15353 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN1O15353 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXN1O15353 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXN1O15353 ZNF962P-201ENST00000443465 3140 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXN1O15353 SNORD3H-201ENST00000384486 214 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXN1O15353 AL513174.1-201ENST00000423182 629 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN1O15353 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXN1O15353 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 TBCAP1-201ENST00000436520 327 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXN1O15353 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.81□□□□□ -1.64
FOXN1O15353 HSPE1P22-201ENST00000456856 327 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 GAPDHP39-201ENST00000481866 979 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 RPL32P34-201ENST00000486380 400 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 RPL7P24-201ENST00000493052 752 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 HMGN1P12-201ENST00000499125 195 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 RNF138P1-201ENST00000502765 546 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 DYNLL1P6-201ENST00000503440 264 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 RPL7L1P13-201ENST00000511702 739 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN1O15353 AC008802.1-201ENST00000519121 791 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN1O15353 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN1O15353 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXN1O15353 MIR3913-1-201ENST00000577744 102 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.81□□□□□ -1.64
FOXN1O15353 AC011816.2-201ENST00000607089 556 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AC008536.2-201ENST00000607284 349 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AL356274.1-201ENST00000617064 410 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 MIR7151-201ENST00000617477 60 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AC010338.1-201ENST00000621823 717 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 AC120349.2-201ENST00000625002 298 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXN1O15353 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXN1O15353 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
FOXN1O15353 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN1O15353 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
FOXN1O15353 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
FOXN1O15353 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN1O15353 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
FOXN1O15353 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN1O15353 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 AC005332.5-201ENST00000591222 2919 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXN1O15353 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.8□□□□□ -1.64
FOXN1O15353 RNU6-248P-201ENST00000410720 107 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 RPL17P12-201ENST00000413391 526 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN1O15353 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN1O15353 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXN1O15353 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN1O15353 RPL23AP81-201ENST00000455252 467 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AC104108.1-201ENST00000509930 412 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 HMGB1P19-201ENST00000517578 577 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AC083923.1-201ENST00000523708 376 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms