Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RNU6-225P-201ENST00000384613 103 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 MIR34A-201ENST00000385130 110 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AL591034.1-201ENST00000407447 340 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 RN7SKP222-201ENST00000410651 315 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 MTND6P32-201ENST00000457611 483 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 S100A11P2-201ENST00000467589 312 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AC096571.1-202ENST00000506634 735 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 ACTR6P1-201ENST00000514311 1104 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 MTCO1P40-201ENST00000574371 625 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 ATP1B3P1-201ENST00000605365 821 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AC016542.2-201ENST00000624201 619 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AP003072.4-201ENST00000624580 310 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 CTSLP2-204ENST00000629029 392 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 AC004944.1-201ENST00000517807 3059 ntBASIC1.48□□□□□ -2.17
LINC01549A6NIU2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC096533.1-201ENST00000411645 353 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AL356379.1-201ENST00000414105 126 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC018634.1-201ENST00000437554 401 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AL118520.1-201ENST00000450770 291 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC146507.1-201ENST00000468335 354 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC090453.1-201ENST00000495560 436 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 CCNG2P1-201ENST00000549521 1000 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 SNRPGP18-201ENST00000553000 214 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC007375.1-201ENST00000554513 578 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 MIR4697-201ENST00000582977 78 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC245128.3-201ENST00000594721 748 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC012493.3-201ENST00000604494 112 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 uc_338.9-201ENST00000617424 182 ntBASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.47□□□□□ -2.17
LINC01549A6NIU2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 HMGB1P5-201ENST00000255320 642 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 MIR196B-201ENST00000384852 84 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 MIR221-201ENST00000385135 110 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 RNA5SP489-201ENST00000410986 109 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC096632.1-201ENST00000427395 310 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 MTCO3P35-201ENST00000485582 781 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 SAP18P1-201ENST00000512058 390 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 UBTFL10-201ENST00000528532 562 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC113192.3-201ENST00000529152 742 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC012182.1-201ENST00000570133 895 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 RPS3AP23-202ENST00000574601 686 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 MIR3122-201ENST00000577243 73 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 OR2AS2P-201ENST00000606902 342 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AL590099.1-201ENST00000615276 138 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC104307.1-201ENST00000616142 196 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.46□□□□□ -2.18
LINC01549A6NIU2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LINC01549A6NIU2 AC103710.2-202ENST00000641454 2853 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 MTCYBP45-201ENST00000435243 565 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 MTCYBP14-201ENST00000457471 715 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 RN7SL636P-201ENST00000497504 294 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AC008565.1-201ENST00000509046 885 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AC113155.1-201ENST00000511141 769 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 PTP4A1P6-201ENST00000531034 478 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms