Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RPL21P129-201ENST00000491732 478 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC034222.1-201ENST00000494052 532 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC108145.1-201ENST00000503770 153 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 BNIP3P41-201ENST00000503774 571 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 RNU6-1003P-201ENST00000517099 105 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AP003033.1-201ENST00000527244 415 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC022878.1-201ENST00000530684 149 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 OR4P1P-201ENST00000530808 1136 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AP003385.6-201ENST00000531603 374 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC063950.1-201ENST00000552036 308 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC120057.2-201ENST00000571520 271 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 TPMTP1-201ENST00000592307 737 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AL451044.1-201ENST00000604867 238 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC004853.1-201ENST00000604902 698 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC013562.2-201ENST00000611632 603 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AL590240.3-201ENST00000621416 943 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 MIR6500-201ENST00000622700 86 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC084035.1-201ENST00000634543 607 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 OR5BE1P-202ENST00000641168 1176 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC012020.1-201ENST00000624541 1728 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 RNU1-15P-201ENST00000353977 144 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 SNORA60-201ENST00000362396 134 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 RNU1-108P-201ENST00000362556 161 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 Y_RNA.598-201ENST00000410480 95 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 RNU2-16P-201ENST00000410712 136 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 RNU4-78P-201ENST00000410940 126 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC245052.5-201ENST00000416320 649 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 SNRPFP4-201ENST00000456366 242 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 snoU13.8-201ENST00000458890 104 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 snoU13.3-201ENST00000459441 104 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC010469.1-201ENST00000463864 576 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC146944.2-203ENST00000502493 354 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC139495.1-202ENST00000513164 354 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 RNU1-45P-201ENST00000517191 141 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 PAICSP4-201ENST00000517543 1253 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 MYL12AP1-201ENST00000518490 515 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 MTND1P15-201ENST00000579262 949 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC079089.3-201ENST00000603094 673 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 SEPT7P9-203ENST00000604116 343 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC112191.3-201ENST00000604371 277 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC138749.5-201ENST00000611461 208 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 AC116165.2-201ENST00000616705 206 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 MIR7154-201ENST00000620673 73 ntBASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TBC1D3FA6NER0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 AC067945.1-201ENST00000342609 618 ntBASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 SNORA62.3-201ENST00000365110 153 ntBASIC4.09□□□□□ -1.75
TBC1D3FA6NER0 Y_RNA.505-201ENST00000384489 102 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms