Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC135628.1-201ENST00000568867 534 ntBASIC3.12□□□□□ -1.91
HFM1A2PYH4 LRRC37A5P-203ENST00000580181 585 ntBASIC3.12□□□□□ -1.91
HFM1A2PYH4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.12□□□□□ -1.91
HFM1A2PYH4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HFM1A2PYH4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HFM1A2PYH4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.11□□□□□ -1.91
HFM1A2PYH4 AC104332.2-201ENST00000429959 156 ntBASIC3.11□□□□□ -1.91
HFM1A2PYH4 AC129850.1-201ENST00000436203 508 ntBASIC3.11□□□□□ -1.91
HFM1A2PYH4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.11□□□□□ -1.91
HFM1A2PYH4 AC089999.1-201ENST00000460336 374 ntBASIC3.11□□□□□ -1.91
HFM1A2PYH4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HFM1A2PYH4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.11□□□□□ -1.91
HFM1A2PYH4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.11□□□□□ -1.91
HFM1A2PYH4 AP000942.3-201ENST00000603702 160 ntBASIC3.11□□□□□ -1.91
HFM1A2PYH4 YWHAEP7-203ENST00000622054 312 ntBASIC3.11□□□□□ -1.91
HFM1A2PYH4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HFM1A2PYH4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.11□□□□□ -1.91
HFM1A2PYH4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HFM1A2PYH4 AL356292.1-201ENST00000283110 373 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 AL591719.1-201ENST00000444669 744 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 GZMAP1-201ENST00000503054 631 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 AC104986.1-201ENST00000517978 436 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 AC009452.1-201ENST00000640823 606 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HFM1A2PYH4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 MTND5P29-201ENST00000458676 1807 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 AC093909.5-201ENST00000621839 1799 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HFM1A2PYH4 ZNF271P-202ENST00000465539 1970 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HFM1A2PYH4 SNORA67.3-201ENST00000384366 140 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 AL121882.1-201ENST00000422893 417 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 AL445646.1-201ENST00000431784 216 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 AC104435.1-201ENST00000483483 166 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 TTC39CP1-201ENST00000512513 755 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 RN7SKP31-201ENST00000516354 278 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.1□□□□□ -1.91
HFM1A2PYH4 AC103710.2-201ENST00000609912 942 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 AC245517.5-201ENST00000611529 162 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 C2orf27A-204ENST00000623058 969 ntBASIC3.1□□□□□ -1.91
HFM1A2PYH4 ZNF720P1-201ENST00000562403 1939 ntBASIC3.09□□□□□ -1.91
HFM1A2PYH4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HFM1A2PYH4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HFM1A2PYH4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
HFM1A2PYH4 RPL23AP70-201ENST00000483361 460 ntBASIC3.09□□□□□ -1.92
HFM1A2PYH4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.09□□□□□ -1.92
HFM1A2PYH4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.09□□□□□ -1.92
HFM1A2PYH4 AC091488.1-201ENST00000604239 660 ntBASIC3.09□□□□□ -1.92
HFM1A2PYH4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HFM1A2PYH4 AC000367.1-201ENST00000452711 1766 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 DCAF13P3-201ENST00000561147 1334 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HFM1A2PYH4 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 AL512283.1-201ENST00000606756 1384 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 Y_RNA.338-201ENST00000365320 114 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HFM1A2PYH4 HMGB1P48-201ENST00000446155 598 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.08□□□□□ -1.92
HFM1A2PYH4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HFM1A2PYH4 AC034268.2-201ENST00000571784 482 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 MIR4498-201ENST00000577599 66 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 AC120053.1-201ENST00000607706 736 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HFM1A2PYH4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.08□□□□□ -1.92
HFM1A2PYH4 AL592437.2-201ENST00000421655 2434 ntBASIC3.08□□□□□ -1.92
HFM1A2PYH4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.08□□□□□ -1.92
HFM1A2PYH4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HFM1A2PYH4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.07□□□□□ -1.92
HFM1A2PYH4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.07□□□□□ -1.92
HFM1A2PYH4 SETP8-201ENST00000435341 628 ntBASIC3.07□□□□□ -1.92
HFM1A2PYH4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.07□□□□□ -1.92
HFM1A2PYH4 AC090543.1-201ENST00000492168 485 ntBASIC3.07□□□□□ -1.92
HFM1A2PYH4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.07□□□□□ -1.92
HFM1A2PYH4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HFM1A2PYH4 MIR6845-201ENST00000613182 61 ntBASIC3.07□□□□□ -1.92
HFM1A2PYH4 AP001148.1-201ENST00000624124 2359 ntBASIC3.06□□□□□ -1.92
HFM1A2PYH4 AC011460.1-201ENST00000636268 1834 ntBASIC3.06□□□□□ -1.92
HFM1A2PYH4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
HFM1A2PYH4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.06□□□□□ -1.92
HFM1A2PYH4 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
HFM1A2PYH4 Y_RNA.164-201ENST00000363709 102 ntBASIC3.06□□□□□ -1.92
HFM1A2PYH4 SNORA26.9-201ENST00000391322 122 ntBASIC3.06□□□□□ -1.92
HFM1A2PYH4 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
HFM1A2PYH4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.06□□□□□ -1.92
HFM1A2PYH4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.06□□□□□ -1.92
HFM1A2PYH4 RNU6-295P-201ENST00000516901 104 ntBASIC3.06□□□□□ -1.92
HFM1A2PYH4 AMZ2P1-203ENST00000565833 850 ntBASIC3.06□□□□□ -1.92
HFM1A2PYH4 AP001004.1-201ENST00000582468 324 ntBASIC3.06□□□□□ -1.92
HFM1A2PYH4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.06□□□□□ -1.92
HFM1A2PYH4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms