Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV30A0A087WSZ9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
TRAV30A0A087WSZ9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV30A0A087WSZ9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV30A0A087WSZ9 CUL1P1-201ENST00000509510 2425 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 FRG1BP-201ENST00000278882 761 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 RNA5SP456-201ENST00000364002 114 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 SET-203ENST00000372688 801 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 SNORA6-201ENST00000384033 151 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 SNORA9-201ENST00000384215 133 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AL360182.1-201ENST00000397433 468 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 UBE2D3P2-201ENST00000424409 445 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AL451062.2-201ENST00000427515 271 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 RPL23AP70-201ENST00000483361 460 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AC079804.2-201ENST00000490376 200 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 SNORA70.24-201ENST00000517233 118 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AP003102.1-201ENST00000525638 661 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AC103810.1-201ENST00000579873 453 ntBASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
TRAV30A0A087WSZ9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 SNORD114-30-201ENST00000364448 72 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 RNU6-301P-201ENST00000384277 107 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 SNORA41-201ENST00000384675 132 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 RPL7P37-201ENST00000425095 738 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 RPS3AP12-201ENST00000443616 753 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 CACYBPP2-201ENST00000453625 678 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AC008280.2-201ENST00000455473 307 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 COX6CP8-201ENST00000522620 226 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AP000889.2-201ENST00000532684 490 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AC087241.2-201ENST00000535801 324 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AC243972.3-201ENST00000539655 198 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AL049874.4-201ENST00000557593 255 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AMZ2P1-203ENST00000565833 850 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AC112503.2-201ENST00000609005 552 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AC055764.2-201ENST00000610089 670 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 AC092159.4-201ENST00000624944 550 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 CU459211.1-201ENST00000635667 749 ntBASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAV30A0A087WSZ9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.96□□□□□ -2.09
TRAV30A0A087WSZ9 ZNF658B-202ENST00000615961 3375 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 RNU6-7-201ENST00000364784 107 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 RNU6-8-201ENST00000365467 107 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 RNU1-52P-201ENST00000384190 164 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 SNORA51.11-201ENST00000384442 131 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 RNA5SP252-201ENST00000391131 119 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 AL356057.3-201ENST00000402607 340 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 AL162578.1-201ENST00000406202 378 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 SNORA81-201ENST00000408493 178 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 AL592148.1-201ENST00000413568 445 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 NUP35P2-201ENST00000416748 943 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 AC008280.1-201ENST00000418851 412 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 MTCO2P17-201ENST00000424336 677 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 RPS24P8-201ENST00000431490 402 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 IPO7P1-201ENST00000442031 636 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 RPL34P26-201ENST00000445636 354 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 RPL23AP15-201ENST00000450202 459 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 AC010285.1-201ENST00000470580 392 ntBASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAV30A0A087WSZ9 CKS1BP7-201ENST00000522230 235 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms