Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SNORA71.2-201ENST00000364941 134 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 SNORA32.2-201ENST00000384049 122 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 RNU6-43P-201ENST00000384302 107 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 MIR1-2-201ENST00000384961 85 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 MIR514A2-201ENST00000385131 88 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 MIR514A3-201ENST00000385132 88 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 SNORA48.7-201ENST00000391302 135 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 RNU6-193P-201ENST00000410977 107 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 GSTM3P2-201ENST00000412746 530 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC006548.1-201ENST00000427470 102 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 RPL23AP30-201ENST00000432419 501 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 NPM1P18-201ENST00000434232 732 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AP000936.3-201ENST00000438127 255 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 FGF7P3-201ENST00000454645 303 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC007547.1-201ENST00000462177 490 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 RPL36AP41-201ENST00000493820 306 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC015795.1-201ENST00000513669 327 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 RNU4-49P-201ENST00000516080 140 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 SNORD27.1-201ENST00000516319 72 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC100784.1-201ENST00000522790 310 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC007224.1-201ENST00000564410 144 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 CR381572.1-201ENST00000625098 102 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 AC093849.1-201ENST00000563631 2209 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 OR14L1P-202ENST00000641545 3009 ntBASIC4.97□□□□□ -1.61
HCFC2Q9Y5Z7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
HCFC2Q9Y5Z7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.96□□□□□ -1.61
HCFC2Q9Y5Z7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 Y_RNA.231-201ENST00000364358 102 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 PRELID3BP11-201ENST00000414230 479 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 MTCO2P27-201ENST00000420740 428 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 DUTP6-201ENST00000425573 462 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 RPS27AP12-201ENST00000429552 465 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 FHP1-201ENST00000442741 703 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 H2AFZP5-201ENST00000446960 382 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AC073415.1-201ENST00000449240 153 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AC006480.1-201ENST00000449887 378 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 MTCO1P29-201ENST00000496868 288 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 HSPD1P15-201ENST00000505573 1122 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 RNA5SP337-201ENST00000517007 109 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 RNU6-1220P-201ENST00000517126 108 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 MIR3138-201ENST00000585238 82 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AC105224.1-201ENST00000587055 421 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AL391813.2-201ENST00000609113 322 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AP005019.3-201ENST00000620418 560 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 U3.53-201ENST00000628922 216 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 AC093671.1-201ENST00000624981 2929 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 XPOTP1-201ENST00000443317 2398 ntBASIC4.96□□□□□ -1.62
HCFC2Q9Y5Z7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HCFC2Q9Y5Z7 AC009951.1-201ENST00000623674 2614 ntBASIC4.95□□□□□ -1.62
HCFC2Q9Y5Z7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HCFC2Q9Y5Z7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HCFC2Q9Y5Z7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCFC2Q9Y5Z7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.95□□□□□ -1.62
HCFC2Q9Y5Z7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms