Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 NPM1P41-201ENST00000512920 831 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 RN7SKP116-201ENST00000516902 319 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 SETP7-201ENST00000552169 453 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 MIR4270-201ENST00000581799 70 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 UBE2L4-201ENST00000587688 464 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC245014.2-201ENST00000603689 287 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC246785.4-201ENST00000605374 287 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC121334.2-201ENST00000605387 271 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AL355472.4-201ENST00000610233 626 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC024941.1-201ENST00000612250 334 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AL158196.1-201ENST00000616786 434 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AP005019.3-201ENST00000620418 560 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AL158801.5-201ENST00000623123 465 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC040168.1-201ENST00000623594 991 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC008785.1-201ENST00000624475 456 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 DHX40P1-201ENST00000588725 1412 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 RAD17P1-201ENST00000418130 2042 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 Y_RNA.296-201ENST00000364930 108 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 MIR708-201ENST00000390708 88 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 RNU6-821P-201ENST00000390995 107 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 RPL17P50-201ENST00000396131 546 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 RPS3AP36-201ENST00000398190 775 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 HSPD1P16-201ENST00000402302 394 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 RN7SKP235-201ENST00000410662 305 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 MTND1P21-201ENST00000412991 285 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 TMSB10P2-201ENST00000416049 131 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC245052.5-201ENST00000416320 649 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 UBE2V1P8-201ENST00000437166 265 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 ARPC3P1-201ENST00000437218 533 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 MTND1P9-201ENST00000453775 944 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 RN7SL585P-201ENST00000470538 280 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 RPS29P22-201ENST00000472363 168 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC025445.1-201ENST00000502728 300 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 MIR4458-201ENST00000578872 75 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AL669831.4-202ENST00000590817 238 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AP000860.1-201ENST00000605250 559 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AF250324.2-201ENST00000608299 610 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC064801.1-201ENST00000612025 407 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 MIR6780A-201ENST00000615089 68 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC012150.2-201ENST00000621300 544 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC068880.5-201ENST00000624331 290 ntBASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHA3Q9Y5H8 AC027287.1-201ENST00000553115 1453 ntBASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 RNU6-989P-201ENST00000362756 107 ntBASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 RPL23AP32-201ENST00000395315 459 ntBASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 SNORA11F-201ENST00000408237 128 ntBASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 MIR548F1-201ENST00000408667 84 ntBASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHA3Q9Y5H8 USP9YP36-201ENST00000424581 829 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms