Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AL592148.3-201ENST00000608771 2646 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 RNU1-64P-201ENST00000365443 163 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 Y_RNA.582-201ENST00000391023 95 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 RAP1BP3-201ENST00000407180 549 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 HMGN1P14-201ENST00000412459 517 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 RPL17P12-201ENST00000413391 526 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 OFD1P18Y-201ENST00000420889 959 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AL389915.1-201ENST00000422463 466 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC004865.1-201ENST00000442276 1003 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AL512326.1-201ENST00000443050 721 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 SNORD42A-201ENST00000459584 64 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 TMED11P-201ENST00000479478 690 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC012170.1-201ENST00000495139 359 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC068305.1-201ENST00000497406 726 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC008549.1-201ENST00000512900 643 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC116347.2-201ENST00000514912 523 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 RNU6-202P-201ENST00000515998 96 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 RNU6-583P-201ENST00000516012 92 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 RNU6-506P-201ENST00000516553 94 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC239860.2-201ENST00000525886 270 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC093519.1-201ENST00000566109 298 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 MIR3913-1-201ENST00000577744 102 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AP001180.3-201ENST00000582221 145 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 NF1P5-201ENST00000588287 448 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC005191.1-201ENST00000603950 358 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC115286.1-201ENST00000604298 434 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AL357078.3-201ENST00000607528 618 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC023043.4-201ENST00000612081 449 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC104010.1-201ENST00000616889 150 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 U6.42-201ENST00000618440 107 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AL713922.2-201ENST00000619384 716 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 C2orf27A-204ENST00000623058 969 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AC116563.2-201ENST00000624751 535 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 AP001486.2-201ENST00000561652 5113 ntBASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB1Q9Y5G3 DBF4P1-201ENST00000412976 1892 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 SNRPEP3-201ENST00000338402 276 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 RNU6-251P-201ENST00000363235 104 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 RNU6-115P-201ENST00000364310 107 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 RNA5SP509-201ENST00000364577 119 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 OR52E6-202ENST00000379946 954 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 SNORA51.12-201ENST00000384448 134 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 MIR659-201ENST00000384963 97 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 MIR134-201ENST00000385258 73 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 SNORA11F-201ENST00000408237 128 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 SNRPFP1-201ENST00000414761 252 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 MTCO2P19-201ENST00000427513 598 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AL121601.2-201ENST00000438019 707 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 GDI2P2-201ENST00000445131 608 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 RPS15AP1-201ENST00000457423 391 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 RPL9P6-201ENST00000492764 598 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 OR4G11P-201ENST00000492842 939 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC023424.2-201ENST00000493479 777 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms