Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 U1.23-201ENST00000610293 146 ntBASIC1.03□□□□□ -2.24
MACF1Q9UPN3 RNU1-68P-201ENST00000615382 146 ntBASIC1.03□□□□□ -2.24
MACF1Q9UPN3 U1.39-201ENST00000621562 146 ntBASIC1.03□□□□□ -2.24
MACF1Q9UPN3 AC091953.2-201ENST00000623979 160 ntBASIC1.03□□□□□ -2.24
MACF1Q9UPN3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC1.03□□□□□ -2.24
MACF1Q9UPN3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
MACF1Q9UPN3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 MTCYBP20-201ENST00000524239 1129 ntBASIC1.03□□□□□ -2.25
MACF1Q9UPN3 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.03□□□□□ -2.25
MACF1Q9UPN3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 RNA5SP380-201ENST00000517190 98 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 MRPS18BP2-201ENST00000434310 759 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC004022.1-201ENST00000447766 1066 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC112673.1-201ENST00000513168 575 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 FAM60DP-201ENST00000524174 632 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC134026.1-201ENST00000623249 2239 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 SNX3P1X-201ENST00000414887 175 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 SKP1P1-201ENST00000438081 489 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC003982.1-202ENST00000469928 248 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC021205.2-201ENST00000480069 347 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 RNA5SP230-201ENST00000517039 122 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AP003497.1-201ENST00000528472 562 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL390240.1-201ENST00000612950 384 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 MTND5P7-201ENST00000413558 1798 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC104332.2-201ENST00000429959 156 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC011242.1-201ENST00000433596 1158 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 MTND4LP3-201ENST00000468320 276 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 CYCSP20-201ENST00000473154 315 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL356321.1-201ENST00000621360 228 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 DEFB109C-201ENST00000382575 264 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 DEFB109B-201ENST00000382656 264 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 U3.40-201ENST00000408706 208 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL691517.1-201ENST00000440833 1235 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC106872.3-201ENST00000495104 446 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AC068831.7-201ENST00000616954 363 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL139811.1-201ENST00000424779 2299 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
MACF1Q9UPN3 AL445437.1-201ENST00000623157 3087 ntBASIC1.02□□□□□ -2.25
MACF1Q9UPN3 SNORD114-22-201ENST00000365423 72 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 RNA5SP127-201ENST00000411051 133 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AL359273.1-201ENST00000510918 627 ntBASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MACF1Q9UPN3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms