Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 AC005341.1-201ENST00000571086 708 ntBASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 MIR4680-201ENST00000580906 66 ntBASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 AC025588.3-201ENST00000604182 274 ntBASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 U4.1-201ENST00000620349 87 ntBASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 AC138965.3-201ENST00000623875 498 ntBASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 AL353662.3-201ENST00000625131 237 ntBASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 AC023421.1-201ENST00000590535 1785 ntBASIC5.6□□□□□ -1.51
SALL4Q9UJQ4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC009229.4-201ENST00000623854 1947 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 MIR133B-201ENST00000362210 119 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 Y_RNA.149-201ENST00000363558 117 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 RNU1-146P-201ENST00000364015 165 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 RNU5E-6P-201ENST00000365574 115 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 U3.32-201ENST00000408116 212 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 RNU4-46P-201ENST00000410818 138 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 RN7SKP58-201ENST00000411010 305 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC114491.1-201ENST00000416095 246 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AL390119.1-201ENST00000440329 312 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC010733.1-201ENST00000451515 401 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 SNORD97-201ENST00000459187 142 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 MIR2053-201ENST00000459295 91 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 RN7SL799P-201ENST00000475891 298 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 SCARNA16.4-201ENST00000516956 187 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AL133271.1-201ENST00000538229 291 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC124068.1-201ENST00000563131 678 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC023043.2-201ENST00000589678 1026 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC008814.1-201ENST00000603797 406 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 IMMP1LP3-201ENST00000604197 224 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AL008729.2-201ENST00000606393 473 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AC000068.2-201ENST00000608816 460 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 MIR6837-201ENST00000620884 64 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 AL357559.1-201ENST00000622228 274 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 MIR6719-201ENST00000622428 87 ntBASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SALL4Q9UJQ4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SALL4Q9UJQ4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
SALL4Q9UJQ4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 SAGE4P-201ENST00000442271 3381 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 AC093775.1-201ENST00000624154 1868 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 RNU6-1078P-201ENST00000364522 103 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 SNORD116-11-201ENST00000383882 92 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 SNORA24.1-201ENST00000384401 135 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 Y_RNA.576-201ENST00000384781 102 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 MRPL42P3-201ENST00000401492 326 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 RNU4-34P-201ENST00000410431 124 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 RPL7P46-201ENST00000425129 740 ntBASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.58□□□□□ -1.52
SALL4Q9UJQ4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms