Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC093755.1-201ENST00000512950 1023 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 RNU4-60P-201ENST00000517239 135 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 HIGD1AP6-201ENST00000521833 279 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 OR8L1P-201ENST00000534005 955 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC079600.2-201ENST00000550076 130 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC006270.2-201ENST00000578523 652 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC006116.7-201ENST00000590141 756 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 DNAJC19P3-201ENST00000594491 331 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 RNU6-156P-201ENST00000621869 107 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC006065.5-201ENST00000623427 349 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AP003476.1-201ENST00000623984 516 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AC068620.4-201ENST00000636730 1182 ntBASIC3.84□□□□□ -1.79
NPC1L1Q9UHC9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPC1L1Q9UHC9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.84□□□□□ -1.8
NPC1L1Q9UHC9 AL136520.1-201ENST00000600311 1322 ntBASIC3.84□□□□□ -1.8
NPC1L1Q9UHC9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AL009174.1-201ENST00000426577 416 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 RPL21P40-201ENST00000428586 483 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 PSMA2P3-201ENST00000429685 675 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC105272.1-201ENST00000438604 198 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC000041.1-201ENST00000439655 175 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AL662791.1-201ENST00000441992 928 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 RPL23AP33-201ENST00000442301 452 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 snoU13.7-201ENST00000459220 104 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 RN7SKP277-201ENST00000516895 283 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC068339.2-201ENST00000534395 618 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC126365.2-201ENST00000580630 379 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 AC006927.2-201ENST00000639256 389 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 MTND5P28-201ENST00000438005 1594 ntBASIC3.83□□□□□ -1.8
NPC1L1Q9UHC9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 MIR9-1-201ENST00000385198 89 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AL035405.1-201ENST00000400795 710 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 BTBD10P2-201ENST00000404779 676 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 RNA5SP21-201ENST00000410917 96 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC013262.1-201ENST00000426710 252 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 RPS26P30-201ENST00000443431 335 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 HMGN3P1-201ENST00000453847 193 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 RPS27P23-201ENST00000487608 251 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AP001025.2-201ENST00000490908 477 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 FAM60DP-201ENST00000524174 632 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AP000857.1-201ENST00000532151 543 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 CYB5AP5-201ENST00000549779 389 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC104072.1-201ENST00000568817 668 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC022069.1-201ENST00000582910 658 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC016542.1-201ENST00000608259 493 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC012531.5-201ENST00000611375 151 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AP003485.2-201ENST00000623636 610 ntBASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPC1L1Q9UHC9 AC016716.1-201ENST00000265882 708 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 MIR26A1-201ENST00000362205 77 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 DSTNP4-201ENST00000399472 474 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 RNU2-21P-201ENST00000410368 188 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 HMGB1P45-201ENST00000435986 653 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 MTCYBP31-201ENST00000438855 1122 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AL138799.3-201ENST00000438968 350 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AC078817.1-201ENST00000492623 435 ntBASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.81□□□□□ -1.8
NPC1L1Q9UHC9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms