Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 MIR6864-201ENST00000617935 70 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC109454.4-201ENST00000623411 649 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC026422.1-201ENST00000623961 452 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 MFSD8-245ENST00000641743 948 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
APOBEC3BQ9UH17 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.89
APOBEC3BQ9UH17 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.21□□□□□ -1.89
APOBEC3BQ9UH17 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.21□□□□□ -1.89
APOBEC3BQ9UH17 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
APOBEC3BQ9UH17 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
APOBEC3BQ9UH17 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
APOBEC3BQ9UH17 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RPL7P26-201ENST00000333817 754 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RNU6-582P-201ENST00000362989 107 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RNU6-839P-201ENST00000363347 108 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RNU6-906P-201ENST00000384700 70 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RNU6-1242P-201ENST00000391052 103 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 MTATP6P20-201ENST00000414147 562 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RPS3AP37-201ENST00000419176 745 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RPL7P44-201ENST00000424827 742 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 DPPA2P1-201ENST00000428060 556 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 MTCO1P3-201ENST00000429327 192 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AL513175.1-201ENST00000431492 780 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 HIGD1AP11-201ENST00000438361 280 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 ATP5C1P1-201ENST00000441945 895 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC079776.3-201ENST00000450665 370 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AL136126.1-201ENST00000473603 402 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 MTCO3P35-201ENST00000485582 781 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC006445.1-201ENST00000491925 405 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RPL7P23-201ENST00000493874 747 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 TMEM248P1-201ENST00000510579 951 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 SCARNA13-201ENST00000516672 275 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AP001207.1-201ENST00000524051 481 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 SNORD39.4-201ENST00000620099 78 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AL136164.4-201ENST00000625013 2135 ntBASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.21□□□□□ -1.9
APOBEC3BQ9UH17 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC007496.3-201ENST00000624987 3443 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 snoZ40.1-201ENST00000364540 72 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 RNU6-444P-201ENST00000383988 108 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 SNORD116-23-201ENST00000384645 92 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 MIR217-201ENST00000384817 110 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 SNORA40.2-201ENST00000390847 128 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL355379.1-201ENST00000405542 640 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL139098.1-201ENST00000407291 389 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL356968.1-201ENST00000416622 474 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC012065.2-201ENST00000421295 375 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL513174.1-201ENST00000423182 629 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 MTCO2P17-201ENST00000424336 677 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 USP9YP24-201ENST00000434374 697 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 USP9YP17-201ENST00000444617 696 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 Z99714.1-201ENST00000450463 807 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 ZNF886P-201ENST00000450781 723 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 RPL27AP5-201ENST00000469428 449 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 RPL7P5-201ENST00000471472 736 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 RNU6-488P-201ENST00000515918 99 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 RNA5SP341-201ENST00000516261 117 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 NDUFB9P3-201ENST00000521269 501 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms