Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 MIR7-3-201ENST00000384898 110 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 MIR218-2-201ENST00000385006 110 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 SYF2P2-201ENST00000417620 583 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC002075.2-201ENST00000425207 252 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 HMGN2P31-201ENST00000432430 273 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 RPS29P12-201ENST00000460178 152 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AL049714.1-201ENST00000466686 347 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC023424.2-201ENST00000493479 777 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC006499.5-201ENST00000505037 514 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 PCBP2P3-201ENST00000509726 843 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 RANP9-201ENST00000519957 271 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AP000867.2-201ENST00000532468 320 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC011492.1-201ENST00000600023 315 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 NUTF2P8-201ENST00000604593 363 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 HSPE1P7-201ENST00000604681 321 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC018816.2-201ENST00000621460 353 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AP000676.4-201ENST00000624659 623 ntBASIC3.36□□□□□ -1.87
HPF1Q9NWY4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.36□□□□□ -1.87
HPF1Q9NWY4 AC091564.4-201ENST00000533934 2194 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 RNA5SP139-201ENST00000364340 117 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 MIR135A2-201ENST00000384854 100 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AL356131.1-201ENST00000405826 414 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 MIR1290-201ENST00000408735 78 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 ATG3P1-201ENST00000419507 911 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 BX842559.1-201ENST00000419615 532 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC245054.1-201ENST00000420944 258 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AL451062.2-201ENST00000427515 271 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AL353705.1-201ENST00000433468 480 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 PTGES3P1-201ENST00000439531 483 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 MTCYBP42-201ENST00000444653 1130 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC112492.1-201ENST00000449607 712 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC079776.3-201ENST00000450665 370 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 RN7SKP282-201ENST00000516824 299 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 DUXAP2-201ENST00000519198 589 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 NDUFS5P6-201ENST00000529136 295 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AP003066.2-201ENST00000529375 555 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 OR4H12P-201ENST00000556269 907 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC020914.6-201ENST00000594327 272 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 DUXAP11-201ENST00000603858 526 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC080013.4-201ENST00000607624 649 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC005332.6-201ENST00000613178 446 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AC069209.1-201ENST00000619282 651 ntBASIC3.35□□□□□ -1.87
HPF1Q9NWY4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPF1Q9NWY4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HPF1Q9NWY4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HPF1Q9NWY4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.34□□□□□ -1.87
HPF1Q9NWY4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HPF1Q9NWY4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HPF1Q9NWY4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HPF1Q9NWY4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HPF1Q9NWY4 AC087359.1-201ENST00000508335 1740 ntBASIC3.34□□□□□ -1.87
HPF1Q9NWY4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HPF1Q9NWY4 SNORA71.3-201ENST00000362582 128 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms