Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 OR1L6-202ENST00000373684 1044 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 SNORA70G-201ENST00000383923 142 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 RNU6-142P-201ENST00000384019 107 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 SNORA51.8-201ENST00000384234 132 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 PPIAP30-201ENST00000415473 519 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 RN7SL705P-201ENST00000481678 294 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 RN7SL667P-201ENST00000582817 298 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 MIR6762-201ENST00000613340 86 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 AC005520.5-201ENST00000613926 164 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 Y_RNA.802-201ENST00000614892 130 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 AC048347.1-201ENST00000624621 427 ntBASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXD4L1Q9NU39 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.34□□□□□ -1.08
FOXD4L1Q9NU39 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.08
FOXD4L1Q9NU39 AC105235.1-201ENST00000623208 1816 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 Y_RNA.420-201ENST00000384043 110 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 SNORA29-201ENST00000384183 140 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 RNU6-72P-201ENST00000384285 79 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 SPATA20P1-201ENST00000423089 438 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 RPL23AP58-201ENST00000440453 469 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AC013429.1-201ENST00000456604 422 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 CEACAMP3-202ENST00000483806 638 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 CARD18-203ENST00000532895 422 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AC068631.3-201ENST00000538831 225 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 DLD-214ENST00000639772 421 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 AL033543.1-201ENST00000623440 13454 ntBASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXD4L1Q9NU39 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 CARF-208ENST00000428585 2513 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 FANCD2P2-201ENST00000437591 1400 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 MAPK10-344ENST00000641718 3746 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 Y_RNA.209-201ENST00000364156 111 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 RNU6-173P-201ENST00000364215 104 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 Y_RNA.542-201ENST00000384641 111 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 Y_RNA.595-201ENST00000410403 105 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 FTLP19-201ENST00000433300 394 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 CKS1BP5-201ENST00000434172 273 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 Z82210.1-201ENST00000440037 231 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 RN7SL688P-201ENST00000471754 275 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 DUTP1-201ENST00000493631 470 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 RN7SKP67-201ENST00000515905 235 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 CYCSP26-201ENST00000534107 320 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 NDUFA3P4-201ENST00000560814 250 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 AC006254.2-201ENST00000603259 279 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 AP001554.1-201ENST00000604533 376 ntBASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXD4L1Q9NU39 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
FOXD4L1Q9NU39 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FOXD4L1Q9NU39 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FOXD4L1Q9NU39 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
FOXD4L1Q9NU39 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
FOXD4L1Q9NU39 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FOXD4L1Q9NU39 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms