Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC244517.1-201ENST00000606030 2086 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AL390862.1-201ENST00000635467 1469 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 Y_RNA.192-201ENST00000363977 102 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 HMGB1P17-201ENST00000403495 628 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AL138880.1-201ENST00000405824 642 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AC245052.5-201ENST00000416320 649 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 ELOCP9-201ENST00000418624 239 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AL049610.1-201ENST00000423374 372 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 RPL26P28-201ENST00000451325 435 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 RPS4XP2-201ENST00000458402 793 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 SNORD11.1-201ENST00000459482 85 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 RPL23AP62-201ENST00000463396 453 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AC006499.5-201ENST00000505037 514 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 HMGB1P22-201ENST00000505315 124 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 RNU6-311P-201ENST00000516224 102 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AC007458.1-201ENST00000542812 373 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 U3.45-201ENST00000607547 219 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 RNVU1-4-201ENST00000612985 164 ntBASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMC4Q9NTJ3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 SNORD51-201ENST00000384320 80 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 PTMAP5-201ENST00000393073 333 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 TIMM9P2-201ENST00000419324 266 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC069157.1-201ENST00000421749 137 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AP000907.1-201ENST00000428428 510 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 EZH2P1-201ENST00000431167 291 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 MTND4P6-201ENST00000438297 472 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 OR5D17P-201ENST00000531492 978 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 TGIF1P1-201ENST00000558095 802 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 MIR4444-1-201ENST00000581696 74 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 MIR4444-2-201ENST00000584390 74 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC022146.1-201ENST00000595307 847 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC007687.1-201ENST00000602704 304 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC243773.3-201ENST00000613270 256 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC040168.1-201ENST00000623594 991 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AC127502.3-201ENST00000636170 1206 ntBASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMC4Q9NTJ3 AL079343.1-201ENST00000572358 1771 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 MIR30E-201ENST00000362104 92 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 SNORA51.2-201ENST00000364595 132 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 RNU6-629P-201ENST00000384061 103 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 MIR490-201ENST00000384865 128 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 BX842559.1-201ENST00000419615 532 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC097262.1-201ENST00000452559 548 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 RPS24P6-201ENST00000452670 400 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 OFD1P3Y-201ENST00000453312 783 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 SUMO2P2-201ENST00000456482 255 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 RPL9P32-201ENST00000464118 620 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 HMGB1P25-201ENST00000468402 607 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC034236.1-201ENST00000469891 373 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC020893.1-201ENST00000502452 580 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC110768.1-201ENST00000509222 400 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms