Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 SNORA14A-201ENST00000364773 135 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 CD24P4-201ENST00000382840 243 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 RNU6-1027P-201ENST00000383998 107 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 RNU6-851P-201ENST00000384565 107 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 RPL7P10-201ENST00000417407 739 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC008280.1-201ENST00000418851 412 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC008173.1-201ENST00000418901 264 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC114973.1-201ENST00000429057 632 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 SAR1AP4-201ENST00000429225 591 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC127537.2-201ENST00000439258 465 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 RABEPKP1-201ENST00000440529 1026 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AL671855.1-201ENST00000446875 1203 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AP001992.1-205ENST00000462248 379 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 HMGB1P25-201ENST00000468402 607 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 HIGD1AP6-201ENST00000521833 279 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AP000857.1-201ENST00000532151 543 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC004217.3-201ENST00000551552 878 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 CR383656.14-201ENST00000551951 406 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 DNAJC8P1-201ENST00000554535 372 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 H3F3AP1-201ENST00000559984 334 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC106734.1-201ENST00000568646 663 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC023824.3-201ENST00000569003 562 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 MIR4506-201ENST00000584693 77 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 ZNF92P2-201ENST00000600543 1059 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 CYCSP41-201ENST00000616920 296 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 HPVC1-201ENST00000629899 1198 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 AC025263.3-201ENST00000622965 1396 ntBASIC2.87□□□□□ -1.95
TREX1Q9NSU2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TREX1Q9NSU2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AL589826.1-201ENST00000340697 249 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 MIR208A-201ENST00000362287 71 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 SNORD56.4-201ENST00000363883 71 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 RNU6-441P-201ENST00000384545 106 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AL590004.2-201ENST00000404787 371 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 RNU6-77P-201ENST00000410554 91 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AL445183.3-201ENST00000414168 502 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 BMS1P22-201ENST00000414726 313 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC112653.1-201ENST00000443851 386 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 MTND2P30-201ENST00000456663 382 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 snoU13.22-201ENST00000459428 104 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC104057.1-201ENST00000515547 497 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 RNU6-56P-201ENST00000516986 93 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC104229.1-201ENST00000561364 255 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC022069.1-201ENST00000582910 658 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 MAGOH2P-202ENST00000584384 429 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 DUXAP4-201ENST00000603046 613 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC025588.3-201ENST00000604182 274 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AP006248.3-201ENST00000623580 594 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AL163152.1-201ENST00000642001 374 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 MFSD8-213ENST00000641134 1327 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 AC000403.1-201ENST00000613696 3585 ntBASIC2.86□□□□□ -1.95
TREX1Q9NSU2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
TREX1Q9NSU2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 RPL9P7-201ENST00000330965 580 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 RNVU1-3-201ENST00000364313 161 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL138885.1-201ENST00000405921 675 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL357078.2-201ENST00000416486 427 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms