Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NIPA2P5-201ENST00000452282 464 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AC233279.1-201ENST00000455300 423 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 RPL21P126-201ENST00000470049 478 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AP001025.2-201ENST00000490908 477 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 RPL36AP41-201ENST00000493820 306 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 RPS4XP18-201ENST00000495480 763 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AC010587.1-201ENST00000505809 469 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AL355375.2-201ENST00000574825 175 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 MIR3118-1-201ENST00000581787 76 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 AL365204.3-201ENST00000612448 685 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 A2MP1-204ENST00000566278 4130 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 SALL4P2-201ENST00000423288 2910 ntBASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM7Q9NR12 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 ZNF137P-201ENST00000456718 1920 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC011155.1-201ENST00000316512 456 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 Y_RNA.67-201ENST00000362870 100 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 RNU6-1120P-201ENST00000362988 108 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 SNORA71.2-201ENST00000364941 134 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 SNORA20.2-201ENST00000383922 131 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 RPS26P8-201ENST00000393490 348 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AP000580.1-201ENST00000404439 358 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 RNA5SP296-201ENST00000410523 111 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC018644.1-201ENST00000429934 551 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 RPS29P17-201ENST00000430795 166 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 MRPL50P4-201ENST00000446432 475 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 RPL7P12-201ENST00000446719 750 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 RPS20P32-201ENST00000456044 356 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 snoU13.22-201ENST00000459428 104 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 RNU6-261P-201ENST00000459506 102 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC104563.1-201ENST00000476147 376 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC034222.1-201ENST00000494052 532 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC026427.2-201ENST00000506228 536 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC006130.2-201ENST00000586202 326 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC007687.1-201ENST00000602704 304 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC115621.1-201ENST00000604653 858 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC121334.2-201ENST00000605387 271 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 MIR6864-201ENST00000617935 70 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC091953.2-201ENST00000623979 160 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 GVINP1-202ENST00000531871 7271 ntBASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM7Q9NR12 AC092125.1-201ENST00000562568 1995 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 RNU6-223P-201ENST00000362830 107 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 SNRPFP1-201ENST00000414761 252 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 RPL35AP12-201ENST00000425362 338 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 AC006946.1-201ENST00000429106 328 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 RPL36AP53-201ENST00000432891 316 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms