Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 FAM133CP-201ENST00000332869 704 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 MIR148B-201ENST00000362252 99 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 Y_RNA.408-201ENST00000383987 102 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 MIR491-201ENST00000384877 84 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AL031736.2-201ENST00000426573 787 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 RPL23AP22-201ENST00000437556 453 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 HMGB1P48-201ENST00000446155 598 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 EXTL2P1-201ENST00000446218 416 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AC108734.3-201ENST00000481241 1165 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 RPL30P11-201ENST00000495304 339 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 SNORA70.24-201ENST00000517233 118 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AP001207.1-201ENST00000524051 481 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 MRPS36P5-201ENST00000551909 298 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AC037471.2-201ENST00000564941 598 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AC069304.3-201ENST00000603938 1084 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 OR6R2P-201ENST00000609216 300 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AC004908.3-201ENST00000610248 625 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 AC022079.1-201ENST00000621546 602 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 MIR622-201ENST00000638396 96 ntBASIC4.43□□□□□ -1.7
SIN3AQ96ST3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SIN3AQ96ST3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC011155.1-201ENST00000316512 456 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 MIR3074-201ENST00000384885 81 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 MIR128-1-201ENST00000384921 82 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC009237.5-201ENST00000414271 501 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 MRPS36P1-201ENST00000421291 307 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 USP9YP31-201ENST00000431405 881 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC092393.1-201ENST00000439625 742 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 HMGB3P8-201ENST00000449709 577 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 Z99714.1-201ENST00000450463 807 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AL136097.1-201ENST00000456945 913 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC010468.1-201ENST00000461022 817 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC117440.1-201ENST00000474107 571 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC026427.2-201ENST00000506228 536 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 RNA5SP341-201ENST00000516261 117 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC009812.2-201ENST00000517657 457 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 PDCL2P2-201ENST00000533651 189 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC010198.2-201ENST00000550612 259 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AL354943.1-201ENST00000572103 781 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 NF1P5-201ENST00000588287 448 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 BNIP3P26-201ENST00000600827 554 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC004825.2-201ENST00000616634 455 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 AC243756.2-201ENST00000618406 463 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 MIR1322-201ENST00000638013 71 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 Z99496.1-201ENST00000469424 1477 ntBASIC4.42□□□□□ -1.7
SIN3AQ96ST3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.42□□□□□ -1.7
SIN3AQ96ST3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 MIR22-201ENST00000362190 85 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 RNU6-1300P-201ENST00000391046 108 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 RSL24D1P4-201ENST00000400938 484 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AL133264.1-201ENST00000407157 562 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 SNORA11.1-201ENST00000408133 129 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 RNA5SP293-201ENST00000410527 113 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 FCF1P2-201ENST00000415284 583 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 LUZP4P1-201ENST00000415420 344 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 MTND1P32-201ENST00000433043 938 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AC010881.1-201ENST00000433830 235 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 YWHAZP8-201ENST00000436935 731 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 RPL21P134-201ENST00000453468 483 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 PNPLA4P1-201ENST00000458328 305 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 RPL5P24-201ENST00000463742 885 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 RPL23AP14-201ENST00000468281 468 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 MTND6P6-201ENST00000478031 263 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AC106872.2-201ENST00000494303 480 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms