Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 LSM1P1-201ENST00000438629 273 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC106872.3-201ENST00000495104 446 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC090453.1-201ENST00000495560 436 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC110792.2-201ENST00000510278 224 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AP004247.1-201ENST00000531556 1289 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC013828.2-201ENST00000532487 235 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 CBX3P7-201ENST00000532876 502 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC107016.1-201ENST00000550463 337 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 LARP7P2-201ENST00000575306 125 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC012417.1-201ENST00000582307 1039 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 MIR4307-201ENST00000582802 84 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 MIR4512-201ENST00000583257 77 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 MAGOH2P-202ENST00000584384 429 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 FAM27D1-201ENST00000612308 341 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC025253.1-201ENST00000613623 543 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC011944.2-201ENST00000624440 683 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 AC130650.2-201ENST00000618736 2403 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 SAGE2P-201ENST00000420011 2126 ntBASIC4.45□□□□□ -1.7
HAPLN3Q96S86 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HAPLN3Q96S86 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 RNU1-132P-201ENST00000364300 164 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 RNA5SP366-201ENST00000365454 123 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 Y_RNA.450-201ENST00000384198 113 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC016769.3-201ENST00000396562 315 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 CIR1P3-201ENST00000405137 479 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 MIR1305-201ENST00000408300 86 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 SNORA11-201ENST00000408789 128 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 MTCYBP24-201ENST00000420387 1106 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 CHIAP3-201ENST00000423668 1133 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 RPS3AP54-201ENST00000435535 734 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 HLA-N-201ENST00000437516 135 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 SNRPEP8-201ENST00000442866 260 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 NFU1P2-201ENST00000448700 469 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC109327.1-201ENST00000471666 403 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC069439.1-201ENST00000494739 167 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC104164.2-201ENST00000496953 495 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 RNF138P1-201ENST00000502765 546 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 RNA5SP49-201ENST00000516450 115 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 RNU6-528P-201ENST00000516926 100 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC022878.1-201ENST00000530684 149 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 MIR544B-201ENST00000582372 78 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC009977.1-201ENST00000586015 570 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC011477.5-201ENST00000586571 259 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 BNIP3P23-201ENST00000599655 511 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC008250.2-201ENST00000615261 205 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC114781.5-201ENST00000615297 108 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AP001506.1-201ENST00000615444 211 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 DUXAP9-208ENST00000622815 614 ntBASIC4.44□□□□□ -1.7
HAPLN3Q96S86 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HAPLN3Q96S86 AC114546.3-201ENST00000623582 1734 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.43□□□□□ -1.7
HAPLN3Q96S86 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HAPLN3Q96S86 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HAPLN3Q96S86 AC067945.1-201ENST00000342609 618 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 RNU1-14P-201ENST00000362759 152 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 Y_RNA.372-201ENST00000365599 102 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 AL583835.1-201ENST00000399570 407 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 CCNG1P1-201ENST00000406783 885 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 RN7SKP235-201ENST00000410662 305 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 RPS3AP3-201ENST00000411933 242 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.43□□□□□ -1.7
HAPLN3Q96S86 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.43□□□□□ -1.7
HAPLN3Q96S86 AL445669.1-201ENST00000426743 755 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 BX890604.2-201ENST00000427883 474 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.43□□□□□ -1.7
HAPLN3Q96S86 MTND5P14-201ENST00000441481 1267 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.43□□□□□ -1.7
HAPLN3Q96S86 PSPHP1-201ENST00000450062 261 ntBASIC4.43□□□□□ -1.7
HAPLN3Q96S86 AL590365.1-201ENST00000450788 243 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms