Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC244517.1-201ENST00000606030 2086 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 RNA5SP296-201ENST00000410523 111 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 RN7SKP17-201ENST00000411242 351 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 RPL31P12-201ENST00000422587 358 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 RPL36AP6-201ENST00000435770 321 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 RPL23AP43-201ENST00000446445 471 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC106872.2-201ENST00000494303 480 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC010350.1-201ENST00000504908 231 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 MRPS35P2-201ENST00000508242 191 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 GLUD1P3-202ENST00000508551 200 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 snoU109.6-201ENST00000516831 118 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 RN7SKP260-201ENST00000516907 149 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC021006.3-201ENST00000530771 192 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC023442.1-201ENST00000531247 422 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AL161670.1-201ENST00000554348 137 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC008782.1-201ENST00000603386 430 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 GVINP1-202ENST00000531871 7271 ntBASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AL049641.1-201ENST00000441055 1948 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 RNU6-179P-201ENST00000363350 107 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 Y_RNA.167-201ENST00000363735 109 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 Y_RNA.188-201ENST00000363952 111 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 RNU1-74P-201ENST00000384108 171 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 RNU6-1226P-201ENST00000384317 107 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AL078599.1-201ENST00000402075 293 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 SSXP10-201ENST00000402595 565 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC069218.2-201ENST00000411665 344 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 VDAC1P9-201ENST00000412766 841 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 USP9YP16-201ENST00000430287 407 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC099670.2-201ENST00000435130 321 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 RAC1P7-201ENST00000445367 377 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 CECR9-201ENST00000453421 199 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 USP9YP23-201ENST00000455085 407 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC007686.1-201ENST00000488511 463 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC068305.1-201ENST00000497406 726 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 CCDC34P1-201ENST00000507441 517 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 RNU6-1038P-201ENST00000516516 104 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 RNU6-256P-201ENST00000516747 97 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC109635.4-202ENST00000531666 412 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AL137161.1-201ENST00000532231 390 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC011487.3-201ENST00000593607 453 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC006272.2-201ENST00000594725 163 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC005014.2-201ENST00000607795 599 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AP005432.2-201ENST00000608162 586 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 Z82243.1-201ENST00000609432 473 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 MIR6133-201ENST00000617057 108 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC85AQ96PX6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms