Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC17Q96LX7 AC018529.3-201ENST00000624212 2254 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 RNU5F-6P-201ENST00000362979 116 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 SNORD3H-201ENST00000384486 214 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 MIR513A2-201ENST00000385249 127 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 PRRC2CP1-201ENST00000404428 159 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC073264.1-201ENST00000411508 416 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC099336.2-201ENST00000422457 254 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 MTCYBP5-201ENST00000423752 1135 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC091286.1-201ENST00000431233 461 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AL451050.1-201ENST00000450126 415 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC099560.2-201ENST00000457554 255 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC091153.1-201ENST00000466297 402 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 EIF5A2P1-201ENST00000564027 460 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC17Q96LX7 LINC00561-201ENST00000565815 2738 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 AL445437.1-201ENST00000623157 3087 ntBASIC4.42□□□□□ -1.7
CCDC17Q96LX7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 RNU6-462P-201ENST00000362659 105 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 RNA5SP51-201ENST00000364750 119 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 RNU6-297P-201ENST00000384636 107 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 SNRPEP2-201ENST00000397592 279 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AL121834.1-202ENST00000404494 277 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 RNU2-28P-201ENST00000410457 189 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 MTND1P23-201ENST00000416931 372 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 OR2B8P-201ENST00000432841 938 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 MTATP6P13-201ENST00000438531 667 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 MTND1P1-201ENST00000445453 368 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 NANOGNBP1-201ENST00000448444 480 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC022034.3-201ENST00000471393 478 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AP000797.1-201ENST00000478870 387 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC106707.2-201ENST00000484182 374 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC006499.2-201ENST00000513470 337 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 RNU6-488P-201ENST00000515918 99 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 RN7SKP18-201ENST00000516005 275 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC009063.1-201ENST00000563342 702 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC141257.3-201ENST00000572906 215 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC005771.1-201ENST00000585581 349 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 PSMA6P4-201ENST00000603247 718 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AP000403.1-201ENST00000603349 851 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC006566.1-201ENST00000608943 513 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC103710.4-201ENST00000609301 899 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AL589743.7-201ENST00000612637 233 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AC009093.8-201ENST00000641769 292 ntBASIC4.41□□□□□ -1.7
CCDC17Q96LX7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC17Q96LX7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC17Q96LX7 AC025125.1-201ENST00000624743 1922 ntBASIC4.4□□□□□ -1.7
CCDC17Q96LX7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC17Q96LX7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.4□□□□□ -1.7
CCDC17Q96LX7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC17Q96LX7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC17Q96LX7 Y_RNA.97-201ENST00000363094 102 ntBASIC4.4□□□□□ -1.71
CCDC17Q96LX7 RNU5F-7P-201ENST00000363696 115 ntBASIC4.4□□□□□ -1.71
CCDC17Q96LX7 RNA5SP424-201ENST00000390988 115 ntBASIC4.4□□□□□ -1.71
CCDC17Q96LX7 HMGB1P11-201ENST00000413899 637 ntBASIC4.4□□□□□ -1.71
CCDC17Q96LX7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC17Q96LX7 ATP5HP2-201ENST00000433885 485 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms