Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-CQ95604 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HLA-CQ95604 MROH3P-201ENST00000435735 2676 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-CQ95604 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HLA-CQ95604 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HLA-CQ95604 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HLA-CQ95604 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-CQ95604 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HLA-CQ95604 Y_RNA.105-201ENST00000363182 111 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 RNA5SP333-201ENST00000363466 118 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 U8.4-201ENST00000363626 134 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 Y_RNA.237-201ENST00000364439 102 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 RNA5SP334-201ENST00000364825 118 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 MIR433-201ENST00000384837 93 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 MIR141-201ENST00000384975 95 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 Y_RNA.793-201ENST00000411222 111 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-CQ95604 RPS15AP40-201ENST00000419621 391 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-CQ95604 AL445305.1-201ENST00000432577 575 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 AC009220.1-201ENST00000451614 275 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-CQ95604 AP002770.2-201ENST00000543613 532 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-CQ95604 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-CQ95604 CPDP1-201ENST00000579660 283 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 MIR4260-201ENST00000583107 67 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 AL031601.2-202ENST00000622650 282 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-CQ95604 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-CQ95604 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HLA-CQ95604 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 AC026951.1-201ENST00000559530 2459 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
HLA-CQ95604 SRRM1P3-201ENST00000426911 2678 ntBASIC6.2□□□□□ -1.42
HLA-CQ95604 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-CQ95604 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-CQ95604 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-CQ95604 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HLA-CQ95604 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
HLA-CQ95604 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-CQ95604 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-CQ95604 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-CQ95604 AC007938.2-201ENST00000604666 2634 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-CQ95604 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-CQ95604 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-CQ95604 AL596244.1-201ENST00000567068 3779 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HLA-CQ95604 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-CQ95604 RNU6-1303P-201ENST00000364841 107 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HLA-CQ95604 RNU6-700P-201ENST00000391043 107 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 AL603910.2-201ENST00000407268 136 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 RPS4XP5-201ENST00000419038 768 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 AC008753.1-201ENST00000423096 284 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 RPL30P3-201ENST00000424262 333 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 AC113412.1-201ENST00000425840 504 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-CQ95604 CYCSP12-201ENST00000437729 300 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 FABP5P2-201ENST00000439042 408 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-CQ95604 RPL7L1P1-201ENST00000448259 785 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 AC092967.1-201ENST00000449016 481 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 Y_RNA.644-201ENST00000459006 113 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 RNU7-120P-201ENST00000459334 63 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 AC006463.2-201ENST00000473326 348 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 RN7SL222P-201ENST00000476452 299 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-CQ95604 AC110792.1-201ENST00000491826 472 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 AC007016.1-201ENST00000512110 244 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 AL671862.1-201ENST00000515851 349 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 SNORA31.3-201ENST00000516029 96 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 Y_RNA.674-201ENST00000516362 113 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 SNORA25.14-201ENST00000516481 132 ntBASIC6.19□□□□□ -1.42
HLA-CQ95604 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.19□□□□□ -1.42
HLA-CQ95604 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
HLA-CQ95604 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-CQ95604 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms