Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 FRG1KP-201ENST00000623592 341 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF1Q92994 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF1Q92994 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BRF1Q92994 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF1Q92994 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF1Q92994 AP000756.2-201ENST00000624168 2567 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF1Q92994 AC139769.1-204ENST00000472297 1931 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF1Q92994 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 CPHL1P-201ENST00000461341 3407 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF1Q92994 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF1Q92994 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 RNU1-63P-201ENST00000383902 164 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 SNORA70F-201ENST00000384142 135 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 RNU6-1226P-201ENST00000384317 107 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 RNU6-1158P-201ENST00000391167 107 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRF1Q92994 RPL36AP36-201ENST00000418616 301 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 UQCRBP1-201ENST00000421129 336 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 RPS12P10-201ENST00000427031 377 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF1Q92994 AL590233.1-201ENST00000430017 456 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC119618.1-201ENST00000434191 222 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC006466.1-201ENST00000438721 289 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF1Q92994 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRF1Q92994 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRF1Q92994 RPL10P17-201ENST00000453852 316 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 HMGB1P15-201ENST00000453854 435 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 RN7SL354P-201ENST00000469282 294 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 RPL23AP72-201ENST00000492447 435 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF1Q92994 Y_RNA.701-201ENST00000516812 110 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC090572.1-201ENST00000519251 160 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF1Q92994 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF1Q92994 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 HMGB1P6-201ENST00000569046 646 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF1Q92994 HMGB2P1-201ENST00000591146 634 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 RPL7P50-201ENST00000600588 727 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC091979.2-201ENST00000607514 214 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AL391813.2-201ENST00000609113 322 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC091905.2-201ENST00000623143 306 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 AC092435.4-201ENST00000623012 4159 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 NXPH1-205ENST00000602349 1953 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF1Q92994 MAPK10-349ENST00000641767 3661 ntBASIC5.32□□□□□ -1.56
BRF1Q92994 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF1Q92994 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
BRF1Q92994 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF1Q92994 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF1Q92994 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
BRF1Q92994 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF1Q92994 AL157700.1-201ENST00000561973 1432 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
BRF1Q92994 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.31□□□□□ -1.56
BRF1Q92994 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BRF1Q92994 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BRF1Q92994 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
BRF1Q92994 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BRF1Q92994 RNA5SP391-201ENST00000363456 119 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 RNU6-359P-201ENST00000365466 108 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRF1Q92994 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 AC068050.1-201ENST00000394891 380 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 AL133270.1-201ENST00000402635 279 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.31□□□□□ -1.56
BRF1Q92994 RPL31P45-201ENST00000419532 356 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.31□□□□□ -1.56
BRF1Q92994 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.31□□□□□ -1.56
BRF1Q92994 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.31□□□□□ -1.56
BRF1Q92994 GPR143P-201ENST00000434155 205 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.31□□□□□ -1.56
BRF1Q92994 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.31□□□□□ -1.56
BRF1Q92994 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.31□□□□□ -1.56
BRF1Q92994 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.31□□□□□ -1.56
BRF1Q92994 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 RPS27AP17-201ENST00000463344 455 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.31□□□□□ -1.56
BRF1Q92994 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.31□□□□□ -1.56
BRF1Q92994 AC021146.3-201ENST00000511911 260 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 Y_RNA.675-201ENST00000516389 149 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.31□□□□□ -1.56
BRF1Q92994 AL442663.2-201ENST00000554385 511 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.31□□□□□ -1.56
BRF1Q92994 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.31□□□□□ -1.56
BRF1Q92994 MIR4795-201ENST00000584182 89 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 VN1R80P-201ENST00000597126 338 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 BPIFA4P-203ENST00000603168 689 ntBASIC5.31□□□□□ -1.56
BRF1Q92994 AL161616.1-201ENST00000611867 286 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms