Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TOPBP1Q92547 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TOPBP1Q92547 RNU6-178P-201ENST00000384631 104 ntBASIC3.53□□□□□ -1.84
TOPBP1Q92547 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.53□□□□□ -1.84
TOPBP1Q92547 EIF2S2P4-201ENST00000461070 984 ntBASIC3.53□□□□□ -1.84
TOPBP1Q92547 AC004263.1-201ENST00000479327 332 ntBASIC3.53□□□□□ -1.84
TOPBP1Q92547 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.53□□□□□ -1.84
TOPBP1Q92547 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.53□□□□□ -1.84
TOPBP1Q92547 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.53□□□□□ -1.84
TOPBP1Q92547 MTND2P17-201ENST00000550281 688 ntBASIC3.53□□□□□ -1.84
TOPBP1Q92547 HMGB3P26-201ENST00000560051 582 ntBASIC3.53□□□□□ -1.84
TOPBP1Q92547 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.53□□□□□ -1.84
TOPBP1Q92547 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TOPBP1Q92547 AP004372.1-201ENST00000604842 844 ntBASIC3.53□□□□□ -1.84
TOPBP1Q92547 AL159169.2-201ENST00000610061 1269 ntBASIC3.53□□□□□ -1.84
TOPBP1Q92547 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TOPBP1Q92547 AP005901.5-201ENST00000545779 1796 ntBASIC3.53□□□□□ -1.85
TOPBP1Q92547 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
TOPBP1Q92547 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TOPBP1Q92547 RNU6-457P-201ENST00000363999 107 ntBASIC3.52□□□□□ -1.85
TOPBP1Q92547 AL589994.1-201ENST00000404962 340 ntBASIC3.52□□□□□ -1.85
TOPBP1Q92547 OR4K11P-201ENST00000431829 904 ntBASIC3.52□□□□□ -1.85
TOPBP1Q92547 SNORD13-201ENST00000459299 104 ntBASIC3.52□□□□□ -1.85
TOPBP1Q92547 RNU6-943P-201ENST00000516960 98 ntBASIC3.52□□□□□ -1.85
TOPBP1Q92547 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.52□□□□□ -1.85
TOPBP1Q92547 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.52□□□□□ -1.85
TOPBP1Q92547 MTND4P35-201ENST00000604257 1375 ntBASIC3.52□□□□□ -1.85
TOPBP1Q92547 AL136964.1-201ENST00000622038 2990 ntBASIC3.52□□□□□ -1.85
TOPBP1Q92547 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TOPBP1Q92547 FRG1BP-201ENST00000278882 761 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 RNU6-1320P-201ENST00000390838 107 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 RNU6-1269P-201ENST00000391139 107 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 GSTA12P-201ENST00000402398 508 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 RNU6-599P-201ENST00000459383 107 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 RNU6-1193P-201ENST00000459461 107 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 AC091179.1-201ENST00000461606 579 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.51□□□□□ -1.85
TOPBP1Q92547 RNU6-368P-201ENST00000620928 107 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 RNU6-538P-201ENST00000622329 107 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 MFSD8-245ENST00000641743 948 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.51□□□□□ -1.85
TOPBP1Q92547 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TOPBP1Q92547 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TOPBP1Q92547 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.5□□□□□ -1.85
TOPBP1Q92547 AL353729.1-201ENST00000425044 720 ntBASIC3.5□□□□□ -1.85
TOPBP1Q92547 AC245517.4-201ENST00000448601 281 ntBASIC3.5□□□□□ -1.85
TOPBP1Q92547 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.5□□□□□ -1.85
TOPBP1Q92547 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.5□□□□□ -1.85
TOPBP1Q92547 AC068305.1-201ENST00000497406 726 ntBASIC3.5□□□□□ -1.85
TOPBP1Q92547 OR52A4P-203ENST00000498233 1014 ntBASIC3.5□□□□□ -1.85
TOPBP1Q92547 RPS27P27-201ENST00000498779 255 ntBASIC3.5□□□□□ -1.85
TOPBP1Q92547 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.5□□□□□ -1.85
TOPBP1Q92547 AC067838.1-201ENST00000606064 577 ntBASIC3.5□□□□□ -1.85
TOPBP1Q92547 MIR6715B-201ENST00000637172 77 ntBASIC3.5□□□□□ -1.85
TOPBP1Q92547 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TOPBP1Q92547 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TOPBP1Q92547 AL133412.1-201ENST00000380194 2992 ntBASIC3.5□□□□□ -1.85
TOPBP1Q92547 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TOPBP1Q92547 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AC233279.1-201ENST00000455300 423 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 RN7SL283P-201ENST00000489055 303 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AL450489.1-201ENST00000612071 468 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TOPBP1Q92547 PNPT1P2-201ENST00000456768 2050 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TOPBP1Q92547 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AC090229.1-201ENST00000590983 1609 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 MIR7-2-201ENST00000384970 110 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 MTND4LP12-201ENST00000448237 295 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 RPL21P18-201ENST00000469899 480 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.49□□□□□ -1.85
TOPBP1Q92547 AL845331.3-202ENST00000562856 261 ntBASIC3.49□□□□□ -1.85
TOPBP1Q92547 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.48□□□□□ -1.85
TOPBP1Q92547 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TOPBP1Q92547 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TOPBP1Q92547 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
TOPBP1Q92547 RLIMP2-201ENST00000427891 1563 ntBASIC3.48□□□□□ -1.85
TOPBP1Q92547 U8.8-201ENST00000365399 135 ntBASIC3.48□□□□□ -1.85
TOPBP1Q92547 RNU6-1263P-201ENST00000384601 106 ntBASIC3.48□□□□□ -1.85
TOPBP1Q92547 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TOPBP1Q92547 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.48□□□□□ -1.85
TOPBP1Q92547 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.48□□□□□ -1.85
TOPBP1Q92547 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.48□□□□□ -1.85
TOPBP1Q92547 ELOCP31-201ENST00000540463 467 ntBASIC3.48□□□□□ -1.85
TOPBP1Q92547 AC008083.2-201ENST00000546707 476 ntBASIC3.48□□□□□ -1.85
TOPBP1Q92547 AC078814.3-201ENST00000553036 491 ntBASIC3.48□□□□□ -1.85
TOPBP1Q92547 AC091834.1-201ENST00000614543 472 ntBASIC3.48□□□□□ -1.85
TOPBP1Q92547 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TOPBP1Q92547 RN7SKP44-201ENST00000363602 316 ntBASIC3.47□□□□□ -1.85
TOPBP1Q92547 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.47□□□□□ -1.85
TOPBP1Q92547 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms