Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC148Q8NFR7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC148Q8NFR7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC148Q8NFR7 AC025263.3-201ENST00000622965 1396 ntBASIC3.36□□□□□ -1.87
CCDC148Q8NFR7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC148Q8NFR7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 OR5H2-201ENST00000355273 945 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 RNU6-441P-201ENST00000384545 106 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 RNA5SP344-201ENST00000411081 104 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 RPL21P32-201ENST00000419877 477 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC093151.1-201ENST00000427711 313 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 S100A11P2-201ENST00000467589 312 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 OR5H5P-201ENST00000503164 928 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC010374.2-201ENST00000512933 535 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 SNORA31.26-201ENST00000517250 137 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC022080.3-201ENST00000544433 482 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC004217.3-201ENST00000551552 878 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AL391156.1-201ENST00000554965 554 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC095057.3-201ENST00000567102 1157 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC092474.3-201ENST00000603022 568 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC096586.1-201ENST00000610267 561 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC022509.4-201ENST00000621404 572 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AP003122.6-201ENST00000623831 495 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AP001002.2-201ENST00000625137 386 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 AC084035.1-201ENST00000634543 607 ntBASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC148Q8NFR7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 SNORA14A-201ENST00000364773 135 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 PAICSP7-201ENST00000419829 962 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 USP9YP36-201ENST00000424581 829 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 AP004217.1-201ENST00000480579 346 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 AC108860.1-201ENST00000484521 383 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 MIR3200-201ENST00000580767 85 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 AC012254.4-201ENST00000588843 273 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC148Q8NFR7 MTND5P31-201ENST00000419366 1374 ntBASIC3.34□□□□□ -1.88
CCDC148Q8NFR7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC148Q8NFR7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CCDC148Q8NFR7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CCDC148Q8NFR7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 RNVU1-3-201ENST00000364313 161 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 MIR525-201ENST00000384978 85 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 MIR483-201ENST00000385070 76 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 AL158825.1-201ENST00000414735 521 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 PTP4A1P3-201ENST00000433661 420 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 ARL4AP2-201ENST00000507378 601 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 XIAPP1-201ENST00000603162 600 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 AC012119.1-201ENST00000603184 222 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 BNIP3P4-201ENST00000604946 565 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 AL360181.4-201ENST00000621752 134 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 AC090617.7-201ENST00000623952 126 ntBASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC148Q8NFR7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 OR5T3-201ENST00000303059 1023 ntBASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 RNU6-1249P-201ENST00000363237 111 ntBASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 RNU6-1005P-201ENST00000384519 107 ntBASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 SNORA44-201ENST00000384584 132 ntBASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 MIR128-1-201ENST00000384921 82 ntBASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 AL390023.1-201ENST00000428836 262 ntBASIC3.32□□□□□ -1.88
CCDC148Q8NFR7 AL139132.1-201ENST00000431587 344 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms