Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC073587.1-201ENST00000447093 876 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AL451050.1-201ENST00000450126 415 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 HMGB1P15-201ENST00000453854 435 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RPS29P2-201ENST00000479278 136 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC109927.2-201ENST00000506416 303 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RNU1-95P-201ENST00000516357 160 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RNU1-128P-201ENST00000516704 160 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RPL23AP53-201ENST00000521854 457 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 DEFB108A-201ENST00000530110 222 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 MIR3682-201ENST00000581338 84 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC009977.1-201ENST00000586015 570 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC090578.1-201ENST00000604955 591 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC126118.1-201ENST00000607744 628 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC072046.2-201ENST00000618366 268 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 OR5AK4P-201ENST00000635912 903 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RPL31P1-201ENST00000398116 372 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AL583835.1-201ENST00000399570 407 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RPL31P2-201ENST00000413849 377 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RPL31P45-201ENST00000419532 356 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 ISCA1P1-201ENST00000426679 387 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AL445669.1-201ENST00000426743 755 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 OR4F13P-201ENST00000428478 931 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 MTND3P21-201ENST00000433774 331 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RABEPKP1-201ENST00000440529 1026 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 NANOGNBP1-201ENST00000448444 480 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC110792.1-201ENST00000491826 472 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC105252.1-201ENST00000503089 286 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 TXNP6-201ENST00000510190 310 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC016065.2-201ENST00000514530 444 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RN7SKP13-201ENST00000515933 244 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RNU6-506P-201ENST00000516553 94 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 SNORA18.6-201ENST00000516792 115 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RNU6-1003P-201ENST00000517099 105 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 RPL21P5-201ENST00000554662 472 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 ZNF519P2-201ENST00000557032 169 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AL353997.4-201ENST00000586196 166 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 BPIFA4P-203ENST00000603168 689 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AC098614.4-201ENST00000607601 462 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 U4.5-201ENST00000617137 123 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 AL445363.3-201ENST00000623080 671 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.13□□□□□ -1.59
SMC1BQ8NDV3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC090971.4-201ENST00000560291 1800 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 SNORD82-201ENST00000365530 70 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 SNORA5A-201ENST00000384111 134 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 C1DP2-201ENST00000418167 426 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 HMGN2P31-201ENST00000432430 273 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC098824.1-201ENST00000453565 980 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AL445433.1-201ENST00000457507 257 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 HMGB1P36-201ENST00000487709 576 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms