Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 PHKBP1-201ENST00000450951 1951 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AL139276.1-201ENST00000311910 1001 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 RNU6-552P-201ENST00000362869 119 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 Y_RNA.80-201ENST00000362996 102 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 Y_RNA.252-201ENST00000364556 101 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 Y_RNA.552-201ENST00000384665 112 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 MIR19A-201ENST00000384878 82 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 RNU6-278P-201ENST00000390945 109 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 CHIAP3-201ENST00000423668 1133 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 BRWD1P3-201ENST00000428816 390 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 RPL12P17-201ENST00000432393 498 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 CEACAMP1-201ENST00000434624 1035 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 RNA5SP103-201ENST00000459503 118 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC010683.1-201ENST00000473673 378 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 COX7A2P2-201ENST00000505291 250 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 RNU6-1143P-201ENST00000516125 104 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AP000827.1-201ENST00000527814 258 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC090022.1-201ENST00000546569 311 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC007956.1-201ENST00000555623 542 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AL118558.2-201ENST00000556294 238 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC040958.1-201ENST00000561102 201 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 MIR4776-2-201ENST00000580204 80 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC011477.5-201ENST00000586571 259 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 BNIP3P25-201ENST00000596023 559 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 AC012409.4-201ENST00000612923 249 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 U2.1-201ENST00000618978 145 ntBASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM42Q8IWZ5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 RNU6-99P-201ENST00000364721 107 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 RNU6-39P-201ENST00000384344 107 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 RNY1P14-201ENST00000384426 108 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 MIR454-201ENST00000390180 115 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 SOD2P1-201ENST00000396543 562 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 RPL21P67-201ENST00000402896 478 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 Y_RNA.646-201ENST00000410980 101 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 VDAC1P9-201ENST00000412766 841 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AL139396.1-201ENST00000421137 167 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 RPS26P47-201ENST00000427219 348 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AL122020.1-201ENST00000472287 459 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 NIP7P2-201ENST00000485801 544 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 RPS24P16-201ENST00000497294 392 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 TRBVA-201ENST00000498804 316 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC020893.1-201ENST00000502452 580 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC025458.1-201ENST00000506046 166 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC002456.2-201ENST00000509356 380 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC021678.3-201ENST00000517893 476 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC087854.1-201ENST00000519706 414 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 TRIM77BP-201ENST00000524985 1119 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC007375.1-201ENST00000554513 578 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC006349.1-201ENST00000555526 235 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 PRPF19P1-201ENST00000584766 898 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AC108738.1-201ENST00000603703 237 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM42Q8IWZ5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms