Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RN7SL459P-201ENST00000481078 302 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AK3P4-201ENST00000504283 583 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC243972.3-201ENST00000539655 198 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC020661.2-201ENST00000560114 134 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 SULT1C2P1-202ENST00000562418 459 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC034105.3-201ENST00000565294 442 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 MIR4330-201ENST00000579077 105 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 RN7SL52P-201ENST00000584271 284 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 HMGB2P1-201ENST00000591146 634 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC234771.5-201ENST00000600161 514 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC008745.1-201ENST00000604064 271 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL160290.3-201ENST00000604869 165 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC010201.1-201ENST00000605051 540 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL121655.1-201ENST00000605811 308 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL133255.1-201ENST00000606374 441 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 RN7SL722P-201ENST00000617780 284 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 RN7SL565P-201ENST00000618246 284 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VRK3Q8IV63 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VRK3Q8IV63 USP9YP4-201ENST00000424401 1745 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 EOGT-210ENST00000615922 1931 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 RNU6-1120P-201ENST00000362988 108 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 RNU6-738P-201ENST00000384531 106 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 TPMTP2-201ENST00000414372 726 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 MRPL50P2-201ENST00000416821 482 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 CBX1P4-201ENST00000439415 457 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 RN7SL738P-201ENST00000470264 297 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 SNORA40.12-201ENST00000516329 111 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 CDH12P4-201ENST00000517835 295 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 CDH12P3-201ENST00000517935 295 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 CDH12P1-201ENST00000518435 295 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC022690.1-201ENST00000526681 550 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AP000827.1-201ENST00000527814 258 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 CYCSP28-201ENST00000534284 321 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AL352979.3-201ENST00000553515 247 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC068831.4-201ENST00000556118 109 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC012182.1-201ENST00000570133 895 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 MIR3167-201ENST00000579623 85 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 RPL7P50-201ENST00000600588 727 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC116312.1-201ENST00000606841 314 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 SNORD91B-202ENST00000608459 222 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC140113.4-201ENST00000622087 222 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 AC005858.4-201ENST00000623191 700 ntBASIC4.37□□□□□ -1.71
VRK3Q8IV63 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VRK3Q8IV63 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VRK3Q8IV63 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 OR56B2P-202ENST00000641377 2453 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 MAPK10-303ENST00000641324 3959 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms