Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC011755.1-201ENST00000623763 2049 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC125336.1-201ENST00000508893 2827 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 Y_RNA.117-201ENST00000363294 101 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 SMIM11P1-201ENST00000369586 178 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 RNU6-339P-201ENST00000384310 107 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 SNORA70.9-201ENST00000384370 135 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AL445189.1-201ENST00000405722 338 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 RNU4-65P-201ENST00000410473 140 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AC015977.1-201ENST00000418887 292 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 FAR2P4-202ENST00000425399 584 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AC236972.1-201ENST00000433225 199 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 PSMD10P3-201ENST00000437000 448 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 CYCSP24-201ENST00000445119 316 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AC009220.1-201ENST00000451614 275 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 SDC4P-201ENST00000453285 601 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 RNU6-470P-201ENST00000515954 104 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 RNY3P15-201ENST00000516297 97 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 RNU6-699P-201ENST00000517081 110 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 OR8R1P-201ENST00000543943 764 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 OR1F2P-201ENST00000570470 933 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 RPL23AP84-201ENST00000571193 464 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AL355810.1-201ENST00000614629 552 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AC020633.1-201ENST00000468439 2247 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 AC239868.2-201ENST00000564237 4527 ntBASIC6.07□□□□□ -1.44
RNF135Q8IUD6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF135Q8IUD6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RPL23P2-201ENST00000320371 421 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RNU1-59P-201ENST00000364829 162 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 Y_RNA.473-201ENST00000384333 102 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RNU6-393P-201ENST00000384475 107 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RNU6-146P-201ENST00000384602 108 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RNU6-33P-201ENST00000384793 107 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 MIR141-201ENST00000384975 95 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 FAR2P2-201ENST00000413041 594 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC080125.1-201ENST00000414888 684 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AL590632.1-201ENST00000424289 371 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC113412.1-201ENST00000425840 504 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RPL23AP69-201ENST00000431134 458 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC006466.1-201ENST00000438721 289 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 MED28P3-201ENST00000444288 531 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 FABP5P13-201ENST00000452144 328 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 FRG2FP-204ENST00000453982 852 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC007967.1-201ENST00000455422 1159 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RPL22P13-201ENST00000493291 347 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC021146.3-201ENST00000511911 260 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RNU6-941P-201ENST00000516346 108 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 RNU6-1332P-201ENST00000516666 104 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC022882.1-201ENST00000532142 501 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC119403.2-201ENST00000590960 598 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AC020634.1-201ENST00000608701 549 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 AL137003.2-201ENST00000606924 2538 ntBASIC6.06□□□□□ -1.44
RNF135Q8IUD6 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms