Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBR3Q6ZT12 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBR3Q6ZT12 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 AP005901.5-201ENST00000545779 1796 ntBASIC2.66□□□□□ -1.98
UBR3Q6ZT12 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 RNU6-328P-201ENST00000390887 106 ntBASIC2.66□□□□□ -1.98
UBR3Q6ZT12 RN7SKP123-201ENST00000410732 291 ntBASIC2.66□□□□□ -1.98
UBR3Q6ZT12 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 AL118520.1-201ENST00000450770 291 ntBASIC2.66□□□□□ -1.98
UBR3Q6ZT12 AP000926.1-201ENST00000479573 241 ntBASIC2.66□□□□□ -1.98
UBR3Q6ZT12 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.66□□□□□ -1.98
UBR3Q6ZT12 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.66□□□□□ -1.98
UBR3Q6ZT12 GMCL1P2-201ENST00000605230 823 ntBASIC2.66□□□□□ -1.98
UBR3Q6ZT12 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
UBR3Q6ZT12 AL592437.2-201ENST00000421655 2434 ntBASIC2.65□□□□□ -1.98
UBR3Q6ZT12 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.65□□□□□ -1.98
UBR3Q6ZT12 SDCBPP3-201ENST00000419629 891 ntBASIC2.65□□□□□ -1.98
UBR3Q6ZT12 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.65□□□□□ -1.98
UBR3Q6ZT12 MUPP-201ENST00000438111 566 ntBASIC2.65□□□□□ -1.98
UBR3Q6ZT12 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.65□□□□□ -1.98
UBR3Q6ZT12 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.65□□□□□ -1.98
UBR3Q6ZT12 OR4R2P-201ENST00000530815 597 ntBASIC2.65□□□□□ -1.98
UBR3Q6ZT12 AP003117.2-201ENST00000606010 545 ntBASIC2.65□□□□□ -1.98
UBR3Q6ZT12 snoU13.31-201ENST00000607291 104 ntBASIC2.65□□□□□ -1.98
UBR3Q6ZT12 AC107294.3-201ENST00000609211 526 ntBASIC2.65□□□□□ -1.98
UBR3Q6ZT12 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
UBR3Q6ZT12 AL136964.1-201ENST00000622038 2990 ntBASIC2.65□□□□□ -1.99
UBR3Q6ZT12 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.65□□□□□ -1.99
UBR3Q6ZT12 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.65□□□□□ -1.99
UBR3Q6ZT12 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
UBR3Q6ZT12 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.65□□□□□ -1.99
UBR3Q6ZT12 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.65□□□□□ -1.99
UBR3Q6ZT12 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.65□□□□□ -1.99
UBR3Q6ZT12 YWHAEP7-203ENST00000622054 312 ntBASIC2.65□□□□□ -1.99
UBR3Q6ZT12 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.65□□□□□ -1.99
UBR3Q6ZT12 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 Y_RNA.118-201ENST00000363300 101 ntBASIC2.64□□□□□ -1.99
UBR3Q6ZT12 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.64□□□□□ -1.99
UBR3Q6ZT12 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 GSTA11P-201ENST00000452866 669 ntBASIC2.64□□□□□ -1.99
UBR3Q6ZT12 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 AC078814.3-201ENST00000553036 491 ntBASIC2.64□□□□□ -1.99
UBR3Q6ZT12 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 AC006116.7-201ENST00000590141 756 ntBASIC2.64□□□□□ -1.99
UBR3Q6ZT12 MIR6132-201ENST00000622083 109 ntBASIC2.64□□□□□ -1.99
UBR3Q6ZT12 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.64□□□□□ -1.99
UBR3Q6ZT12 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBR3Q6ZT12 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
UBR3Q6ZT12 U8.8-201ENST00000365399 135 ntBASIC2.63□□□□□ -1.99
UBR3Q6ZT12 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
UBR3Q6ZT12 MIR583-201ENST00000384846 75 ntBASIC2.63□□□□□ -1.99
UBR3Q6ZT12 AC003989.2-201ENST00000440224 169 ntBASIC2.63□□□□□ -1.99
UBR3Q6ZT12 AC233279.1-201ENST00000455300 423 ntBASIC2.63□□□□□ -1.99
UBR3Q6ZT12 TRBV26-201ENST00000456572 344 ntBASIC2.63□□□□□ -1.99
UBR3Q6ZT12 RPL23AP44-201ENST00000482216 473 ntBASIC2.63□□□□□ -1.99
UBR3Q6ZT12 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.63□□□□□ -1.99
UBR3Q6ZT12 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.63□□□□□ -1.99
UBR3Q6ZT12 AL359198.2-201ENST00000611836 194 ntBASIC2.63□□□□□ -1.99
UBR3Q6ZT12 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBR3Q6ZT12 RN7SKP226-201ENST00000364912 300 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 AC009302.1-201ENST00000417147 390 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 RPL36AP6-201ENST00000435770 321 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.62□□□□□ -1.99
UBR3Q6ZT12 AC110588.1-201ENST00000559699 137 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 MIR4781-201ENST00000585250 76 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.62□□□□□ -1.99
UBR3Q6ZT12 AC009452.1-201ENST00000640823 606 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UBR3Q6ZT12 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
UBR3Q6ZT12 RNU1-51P-201ENST00000365345 176 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 MIR1287-201ENST00000408492 90 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 LUZP4P1-201ENST00000415420 344 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 SEC63P1-201ENST00000425785 1258 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 USP9YP7-201ENST00000436723 430 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 USP9YP32-201ENST00000452432 430 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 CFTRP1-201ENST00000456646 183 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 TRAV11-201ENST00000539512 339 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.62□□□□□ -1.99
UBR3Q6ZT12 AL161431.1-201ENST00000618966 4205 ntBASIC2.62□□□□□ -1.99
UBR3Q6ZT12 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.61□□□□□ -1.99
UBR3Q6ZT12 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.61□□□□□ -1.99
UBR3Q6ZT12 WWP1P1-201ENST00000466609 2769 ntBASIC2.61□□□□□ -1.99
UBR3Q6ZT12 RNU6-457P-201ENST00000363999 107 ntBASIC2.61□□□□□ -1.99
UBR3Q6ZT12 RNU6-1140P-201ENST00000410517 106 ntBASIC2.61□□□□□ -1.99
UBR3Q6ZT12 AC007390.1-201ENST00000415722 356 ntBASIC2.61□□□□□ -1.99
UBR3Q6ZT12 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.61□□□□□ -1.99
UBR3Q6ZT12 AL645939.1-201ENST00000453429 797 ntBASIC2.61□□□□□ -1.99
UBR3Q6ZT12 RPL36AP21-201ENST00000490372 323 ntBASIC2.61□□□□□ -1.99
UBR3Q6ZT12 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms