Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 CCNG1P1-201ENST00000406783 885 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC138393.2-201ENST00000414742 246 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AL590609.2-201ENST00000421430 368 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC234779.1-201ENST00000425910 285 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC083863.1-201ENST00000438811 231 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 MTATP6P30-201ENST00000443540 664 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AMD1P1-201ENST00000457220 922 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 RPS23P7-201ENST00000466210 444 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 RPL23AP12-201ENST00000467573 473 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC026979.1-201ENST00000492525 396 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC019235.1-201ENST00000503847 207 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC098799.2-201ENST00000509466 868 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 PTGES3P3-201ENST00000511479 482 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 RNU6-347P-201ENST00000516658 105 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 MTCO2P4-201ENST00000517968 247 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AP001646.1-201ENST00000527936 915 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AP000790.1-201ENST00000528891 737 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AL389895.1-201ENST00000554127 252 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 PSMA6P4-201ENST00000603247 718 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC103710.4-201ENST00000609301 899 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 MIR6867-201ENST00000610636 67 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC093591.3-201ENST00000634516 308 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 RPL32P3-201ENST00000359025 275 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 CALM2P3-201ENST00000400429 449 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 MIR1251-201ENST00000408552 70 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 Y_RNA.598-201ENST00000410480 95 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC108032.1-201ENST00000416706 207 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AL356095.1-201ENST00000417217 199 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC007742.1-201ENST00000425789 329 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 BX890604.2-201ENST00000427883 474 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC087650.1-201ENST00000431445 468 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 MTND3P23-201ENST00000431980 347 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 ELOCP26-201ENST00000436067 329 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 HMGB1P37-201ENST00000439613 609 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC004865.1-201ENST00000442276 1003 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC112653.1-201ENST00000443851 386 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 RPL39P6-201ENST00000448289 150 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 MTND5P20-201ENST00000448677 143 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 PSPHP1-201ENST00000450062 261 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 USP9YP12-201ENST00000450481 570 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC092001.1-201ENST00000453012 261 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 RPL23AP2-201ENST00000471227 466 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AL132838.2-201ENST00000492041 314 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC005912.1-201ENST00000495392 255 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC114981.1-201ENST00000503897 678 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AF131216.2-201ENST00000512316 564 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 RNA5SP216-201ENST00000516111 123 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms