Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 Z98941.1-201ENST00000407764 100 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 AC009237.8-201ENST00000445492 379 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 AL137159.1-201ENST00000452808 512 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 OR10D4P-201ENST00000525892 951 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 BMS1P7-201ENST00000602440 1052 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 AC009831.4-201ENST00000620744 325 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 EI24P1-201ENST00000416584 867 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 RPS3AP9-201ENST00000417027 792 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 GTF2IP23-201ENST00000423746 351 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 AC093278.1-201ENST00000494700 600 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.05□□□□□ -2.08
RIF1Q5UIP0 MIR4285-201ENST00000581001 85 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 CU459211.1-201ENST00000635667 749 ntBASIC2.05□□□□□ -2.08
RIF1Q5UIP0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RIF1Q5UIP0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RIF1Q5UIP0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.04□□□□□ -2.08
RIF1Q5UIP0 AL139156.1-201ENST00000412785 841 ntBASIC2.04□□□□□ -2.08
RIF1Q5UIP0 SDCBPP3-201ENST00000419629 891 ntBASIC2.04□□□□□ -2.08
RIF1Q5UIP0 AC092427.1-202ENST00000430569 476 ntBASIC2.04□□□□□ -2.08
RIF1Q5UIP0 AL606490.7-201ENST00000433136 191 ntBASIC2.04□□□□□ -2.08
RIF1Q5UIP0 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC2.04□□□□□ -2.08
RIF1Q5UIP0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
RIF1Q5UIP0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.04□□□□□ -2.08
RIF1Q5UIP0 SPATA2P1-201ENST00000431223 2055 ntBASIC2.04□□□□□ -2.08
RIF1Q5UIP0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RIF1Q5UIP0 AC022336.2-201ENST00000568966 2538 ntBASIC2.04□□□□□ -2.08
RIF1Q5UIP0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RIF1Q5UIP0 RNU6-316P-201ENST00000391027 107 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 AC007395.1-201ENST00000451333 677 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.03□□□□□ -2.08
RIF1Q5UIP0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RIF1Q5UIP0 AL359740.1-201ENST00000624340 592 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.03□□□□□ -2.08
RIF1Q5UIP0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.03□□□□□ -2.08
RIF1Q5UIP0 RNA5SP190-201ENST00000365222 118 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 RNU6-805P-201ENST00000365643 106 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.03□□□□□ -2.08
RIF1Q5UIP0 MIR9-3-201ENST00000385084 90 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.03□□□□□ -2.08
RIF1Q5UIP0 POLR2J4-204ENST00000418424 324 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 PPIAP17-201ENST00000438507 471 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 SNORD13-201ENST00000459299 104 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.03□□□□□ -2.08
RIF1Q5UIP0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.03□□□□□ -2.08
RIF1Q5UIP0 AC025946.2-201ENST00000603398 234 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 MIR3199-2-201ENST00000636243 86 ntBASIC2.03□□□□□ -2.08
RIF1Q5UIP0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AL121594.1-201ENST00000475906 575 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AC011604.1-201ENST00000545978 196 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 RNU6-342P-201ENST00000384521 104 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AL138878.1-201ENST00000405131 347 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 OR4K11P-201ENST00000431829 904 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 GAPDHP27-201ENST00000447427 1020 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AC007182.2-201ENST00000489251 402 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 HMGN1P7-201ENST00000491722 313 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 DYNLL1P6-201ENST00000503440 264 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AC055876.1-202ENST00000567053 138 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AC015911.5-201ENST00000587076 451 ntBASIC2.02□□□□□ -2.09
RIF1Q5UIP0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
RIF1Q5UIP0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 SNORA51.11-201ENST00000384442 131 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AL590004.2-201ENST00000404787 371 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 LINC00888-204ENST00000487386 421 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AC135721.1-201ENST00000497954 479 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 RPAP2P1-201ENST00000603626 1168 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 ATG3P1-201ENST00000419507 911 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AL353597.2-202ENST00000434901 373 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AC021146.5-201ENST00000503544 545 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 AC083760.1-201ENST00000589621 670 ntBASIC2.01□□□□□ -2.09
RIF1Q5UIP0 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms