Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RPL23AP15-201ENST00000450202 459 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 snoU13.7-201ENST00000459220 104 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 NCOR1P1-202ENST00000486162 291 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC112198.4-201ENST00000515450 351 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 AF279873.1-201ENST00000523393 313 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC239860.2-201ENST00000525886 270 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC092451.2-201ENST00000538746 658 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC090312.2-201ENST00000582687 378 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 AL020997.3-201ENST00000602843 359 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.11□□□□□ -1.91
SMARCB1Q12824 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMARCB1Q12824 ZNF849P-201ENST00000594711 1566 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMARCB1Q12824 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCB1Q12824 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCB1Q12824 RNU6-600P-201ENST00000362524 99 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 U3.6-201ENST00000363622 211 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RNU6-207P-201ENST00000384137 107 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 Y_RNA.510-201ENST00000384511 114 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RNU6-932P-201ENST00000391108 106 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 RPL31P1-201ENST00000398116 372 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RNU2-71P-201ENST00000411395 189 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RPS15AP40-201ENST00000419621 391 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC246680.2-201ENST00000422106 389 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 DEFB130D-201ENST00000426866 237 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RPL21P2-201ENST00000440049 481 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC092170.1-201ENST00000440211 356 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC004865.1-201ENST00000442276 1003 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AL590399.6-201ENST00000446396 307 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 HMGN1P5-201ENST00000448591 263 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC233982.1-201ENST00000451247 436 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 NF1P3-201ENST00000457709 450 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RNU7-140P-201ENST00000459546 60 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCB1Q12824 HMGN2P13-201ENST00000476476 274 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RPS29P26-201ENST00000477483 171 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 RN7SL633P-201ENST00000488974 297 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC117522.3-201ENST00000507974 584 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC104108.1-201ENST00000509930 412 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 RNU6-202P-201ENST00000515998 96 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AP003355.1-201ENST00000518956 587 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 MTND2P7-201ENST00000521337 640 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC004217.3-201ENST00000551552 878 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC093510.2-201ENST00000562820 896 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 EIF5A2P1-201ENST00000564027 460 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 AL109653.1-201ENST00000603091 248 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AL359535.1-201ENST00000612100 1087 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC090617.7-201ENST00000623952 126 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCB1Q12824 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCB1Q12824 AC107081.3-201ENST00000612715 2034 ntBASIC3.1□□□□□ -1.91
SMARCB1Q12824 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SMARCB1Q12824 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 EIF5P1-201ENST00000400019 1231 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 MIR887-201ENST00000401258 79 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 HSPE1P1-201ENST00000421494 318 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 AL009174.1-201ENST00000426577 416 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 BX276092.4-201ENST00000452056 248 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 CDC42P1-201ENST00000456658 548 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 HIGD1AP13-201ENST00000509878 289 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AC016065.2-201ENST00000514530 444 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 PRELID3BP4-201ENST00000515476 571 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 RN7SKP244-201ENST00000516513 307 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms