Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.83□□□□□ -1.8
LTBQ06643 RPL31P52-201ENST00000407532 367 ntBASIC3.83□□□□□ -1.8
LTBQ06643 RNA5SP36-201ENST00000410197 133 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.83□□□□□ -1.8
LTBQ06643 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.83□□□□□ -1.8
LTBQ06643 AL121601.2-201ENST00000438019 707 ntBASIC3.83□□□□□ -1.8
LTBQ06643 LSM1P1-201ENST00000438629 273 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AL512326.1-201ENST00000443050 721 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.83□□□□□ -1.8
LTBQ06643 Z99127.3-201ENST00000448158 395 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 RPL23AP15-201ENST00000450202 459 ntBASIC3.83□□□□□ -1.8
LTBQ06643 USP9YP12-201ENST00000450481 570 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.83□□□□□ -1.8
LTBQ06643 MEMO1P3-201ENST00000459811 302 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AC146507.1-201ENST00000468335 354 ntBASIC3.83□□□□□ -1.8
LTBQ06643 RPS3AP17-201ENST00000472594 777 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.83□□□□□ -1.8
LTBQ06643 AL132838.2-201ENST00000492041 314 ntBASIC3.83□□□□□ -1.8
LTBQ06643 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 NDUFB4P2-201ENST00000509515 391 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.83□□□□□ -1.8
LTBQ06643 RNA5SP73-201ENST00000516744 108 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 AC090515.3-201ENST00000560431 315 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AC006960.3-201ENST00000561845 705 ntBASIC3.83□□□□□ -1.8
LTBQ06643 SNORA59B-202ENST00000578183 701 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.83□□□□□ -1.8
LTBQ06643 PRELID3BP8-201ENST00000604148 295 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AL161729.4-201ENST00000604650 476 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AP000860.1-201ENST00000605250 559 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AC092954.2-201ENST00000609103 430 ntBASIC3.83□□□□□ -1.8
LTBQ06643 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 AC243773.3-201ENST00000613270 256 ntBASIC3.83□□□□□ -1.8
LTBQ06643 AL158196.1-201ENST00000616786 434 ntBASIC3.83□□□□□ -1.8
LTBQ06643 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
LTBQ06643 AC112484.5-201ENST00000624189 228 ntBASIC3.83□□□□□ -1.8
LTBQ06643 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 FAM157B-203ENST00000639350 358 ntBASIC3.83□□□□□ -1.8
LTBQ06643 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 AC022031.1-201ENST00000585985 2593 ntBASIC3.83□□□□□ -1.8
LTBQ06643 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
LTBQ06643 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LTBQ06643 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LTBQ06643 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LTBQ06643 AC097504.1-201ENST00000515103 2415 ntBASIC3.82□□□□□ -1.8
LTBQ06643 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.82□□□□□ -1.8
LTBQ06643 AC025125.1-201ENST00000624743 1922 ntBASIC3.82□□□□□ -1.8
LTBQ06643 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LTBQ06643 AC092162.3-201ENST00000624511 1624 ntBASIC3.82□□□□□ -1.8
LTBQ06643 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LTBQ06643 DCAF13P1-201ENST00000495256 1330 ntBASIC3.82□□□□□ -1.8
LTBQ06643 RNU1-14P-201ENST00000362759 152 ntBASIC3.82□□□□□ -1.8
LTBQ06643 RNU2-28P-201ENST00000410457 189 ntBASIC3.82□□□□□ -1.8
LTBQ06643 Y_RNA.598-201ENST00000410480 95 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.82□□□□□ -1.8
LTBQ06643 USP9YP6-201ENST00000413550 854 ntBASIC3.82□□□□□ -1.8
LTBQ06643 RPL7P30-201ENST00000420888 709 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.82□□□□□ -1.8
LTBQ06643 GLRXP1-201ENST00000423261 334 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC007742.1-201ENST00000425789 329 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LTBQ06643 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 RPL37P1-201ENST00000432310 284 ntBASIC3.82□□□□□ -1.8
LTBQ06643 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 ELOCP26-201ENST00000436067 329 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC092427.1-201ENST00000439177 601 ntBASIC3.82□□□□□ -1.8
LTBQ06643 RPS3AP12-201ENST00000443616 753 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 AL451050.1-201ENST00000450126 415 ntBASIC3.82□□□□□ -1.8
LTBQ06643 USP9YP34-201ENST00000453983 808 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.82□□□□□ -1.8
LTBQ06643 AC092989.1-201ENST00000481235 277 ntBASIC3.82□□□□□ -1.8
LTBQ06643 RPL7P24-201ENST00000493052 752 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC146944.2-203ENST00000502493 354 ntBASIC3.82□□□□□ -1.8
LTBQ06643 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LTBQ06643 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LTBQ06643 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 AC139495.1-202ENST00000513164 354 ntBASIC3.82□□□□□ -1.8
LTBQ06643 MTND5P4-201ENST00000514978 288 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.82□□□□□ -1.8
LTBQ06643 RNA5SP216-201ENST00000516111 123 ntBASIC3.82□□□□□ -1.8
LTBQ06643 RNA5SP49-201ENST00000516450 115 ntBASIC3.82□□□□□ -1.8
LTBQ06643 RNA5SP519-201ENST00000516480 119 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.82□□□□□ -1.8
LTBQ06643 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.82□□□□□ -1.8
LTBQ06643 AP004247.1-201ENST00000531556 1289 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms